RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TCEAL3Q969E4 200 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 PCED1BQ96HM7 432 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 TTLL2Q9BWV7 592 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 RNF38Q9H0F5 515 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 GZF1Q9H116 711 aaPredicted RBP17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 EBF1Q9UH73 591 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 PCDHGA5Q9Y5G8 931 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 PTPRDP23468 1912 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 HELZP42694 1942 aaKnown RBP17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 CNOT1A5YKK6 2376 aaKnown RBP17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 K7EQS6 105 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 LEFTY2O00292 366 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 APBB3O95704 486 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 KCNA4P22459 653 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 MPLP40238 635 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 PSMD2Q13200 908 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 SURF1Q15526 300 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 MDH1BQ5I0G3 518 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 STPG1Q5TH74 334 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 IL31Q6EBC2 164 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 DENND5BQ6ZUT9 1274 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 ZNF507Q8TCN5 953 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 MMS19Q96T76 1030 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 AGPAT3Q9NRZ7 376 aa17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 MAP1BP46821 2468 aaKnown RBP17.94■□□□□ 0.46
HDGFL3-203ENST00000563404 ZNF840PA6NDX5 716 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 F8VP50 259 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 EIF3DO15371 548 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 STK38Q15208 465 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 MAPRE1Q15691 268 aaKnown RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 SNRNP35Q16560 246 aaKnown RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 N4BP2L1Q5TBK1 243 aaPredicted RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 SFTPA1Q8IWL2 248 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 USP33Q8TEY7 942 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 ZNF516Q92618 1163 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 EXOC4Q96A65 974 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 ACDQ96AP0 544 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 CEP295NLQ96MC4 621 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 DPEP3Q9H4B8 488 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 ZSCAN16Q9H4T2 348 aaPredicted RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 TRPM5Q9NZQ8 1165 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 INVSQ9Y283 1065 aa17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 R3HCC1Q9Y3T6 440 aaKnown RBP17.93■□□□□ 0.46
HDGFL3-203ENST00000563404 CLIC2O15247 247 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 STX6O43752 255 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 TACC1O75410 805 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 NFATC1O95644 943 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 OLFM2O95897 454 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CYP17A1P05093 508 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 DLATP10515 647 aaKnown RBP17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CASP1P29466 404 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 GNL1P36915 607 aaPredicted RBP17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 SEC13P55735 322 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 NOP14P78316 857 aaKnown RBP17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 SLC7A9P82251 487 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CYP24A1Q07973 514 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 EHHADHQ08426 723 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 MESP2Q0VG99 397 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 NR1H3Q13133 447 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 PSMD6Q15008 389 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 STXBP4Q6ZWJ1 553 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 DDX1Q92499 740 aaKnown RBP17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 DHX58Q96C10 678 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 C8orf48Q96LL4 319 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 CGRRF1Q99675 332 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 KIAA1586Q9HCI6 787 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 VPS45Q9NRW7 570 aa17.92■□□□□ 0.46
HDGFL3-203ENST00000563404 SCAMP3O14828 347 aaKnown RBP17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 TRIM66O15016 1216 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 SPTLC2O15270 562 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 PFKLP17858 780 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 PTPN1P18031 435 aaKnown RBP17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 TNNI1P19237 187 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 ANXA13P27216 316 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 PMLP29590 882 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 CYP2J2P51589 502 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 DGKEP52429 567 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 ASIC1P78348 528 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 C2orf27AQ580R0 203 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 FAM26FQ5R3K3 315 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 FILIP1Q7Z7B0 1213 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 NELFCDQ8IXH7 590 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 ADGRG2Q8IZP9 1017 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 OR6B3Q8NGW1 331 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 SCFD1Q8WVM8 642 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 CCDC127Q96BQ5 260 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 C7orf25Q9BPX7 421 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 TPSD1Q9BZJ3 242 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 ZNF518BQ9C0D4 1074 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 SMPD4Q9NXE4 827 aa17.91■□□□□ 0.46
HDGFL3-203ENST00000563404 CPQQ9Y646 472 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms