RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 DPYSL2Q16555 572 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 LRRFIP1Q32MZ4 808 aaKnown RBP5.04□□□□□ -1.6
SMG1-207ENST00000563235 UAP1L1Q3KQV9 507 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 CYP27C1Q4G0S4 372 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 CES4AQ5XG92 561 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 DENND5AQ6IQ26 1287 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 PAPD4Q6PIY7 484 aaKnown RBP5.04□□□□□ -1.6
SMG1-207ENST00000563235 MPRIPQ6WCQ1 1025 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 DTHD1Q6ZMT9 781 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 PTCHD4Q6ZW05 846 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 RSPH3Q86UC2 560 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 RTN4RL1Q86UN2 441 aaPredicted RBP5.04□□□□□ -1.6
SMG1-207ENST00000563235 SCYL3Q8IZE3 742 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 OR6J1Q8NGC5 347 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 HUS1BQ8NHY5 278 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 ZDHHC1Q8WTX9 485 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 LMBR1Q8WVP7 490 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 PPP1R14AQ96A00 147 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 COA7Q96BR5 231 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 SIPA1Q96FS4 1042 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 CORO1BQ9BR76 489 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 ZNF518BQ9C0D4 1074 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 FANCEQ9HB96 536 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 TMEM39AQ9NV64 488 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 MOCS1Q9NZB8 636 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 AMACRQ9UHK6 382 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 ANAPC5Q9UJX4 755 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 ANGPTL2Q9UKU9 493 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 PADI4Q9UM07 663 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 USP15Q9Y4E8 981 aaPredicted RBP5.04□□□□□ -1.6
SMG1-207ENST00000563235 FHOD1Q9Y613 1164 aa5.04□□□□□ -1.6
SMG1-207ENST00000563235 SLC9B1P1A6NJY1 282 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PTGES3LE9PB15 166 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PRDM1O75626 825 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 THP07101 528 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PLCG1P19174 1290 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EEF1GP26641 437 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 WNT5AP41221 380 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NT5C2P49902 561 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PTPN5P54829 565 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RPS26P62854 115 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 BASP1P80723 227 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 ELP6Q0PNE2 266 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RALGDSQ12967 914 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PDK1Q15118 436 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 KCNT1Q5JUK3 1230 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MORN1Q5T089 497 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NBPF14Q5TI25 921 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 KIF6Q6ZMV9 814 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TMC6Q7Z403 805 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 DDX53Q86TM3 631 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 ZNF227Q86WZ6 799 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NKAIN4Q8IVV8 208 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PHC2Q8IXK0 858 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 DPP10Q8N608 796 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NEK11Q8NG66 645 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CITED2Q99967 270 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 HEPHQ9BQS7 1158 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ORAI3Q9BRQ5 295 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 NUP85Q9BW27 656 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 MIR1-1HGQ9H1L0 117 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CARD9Q9H257 536 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 XKR8Q9H6D3 395 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PSTPIP2Q9H939 334 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 ERVMER34-1Q9H9K5 563 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 LY9Q9HBG7 655 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 AGPAT3Q9NRZ7 376 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 USP36Q9P275 1121 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 SUSD2Q9UGT4 822 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 NAALADL1Q9UQQ1 740 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 CLCA3PQ9Y6N3 262 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 KIF14Q15058 1648 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 KTN1Q86UP2 1357 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 A0A1W2PP55 124 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 A0A1W2PPC4 97 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EIF3CLB5ME19 914 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 GTPBP1O00178 669 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 AGRPO00253 132 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PGRMC2O15173 223 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 TEX28O15482 410 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SCAF4O95104 1147 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 GGPS1O95749 300 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 GAAP10253 952 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PLCD1P51178 756 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 STAT5BP51692 787 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RAC3P60763 192 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 EIF4A1P60842 406 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 RPP38P78345 283 aaKnown RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 KRT17Q04695 432 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 RFTN1Q14699 578 aaPredicted RBP5.03□□□□□ -1.6
SMG1-207ENST00000563235 CYP2A13Q16696 494 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 FBXO43Q4G163 708 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 PDPK2PQ6A1A2 396 aa5.03□□□□□ -1.6
SMG1-207ENST00000563235 SEZ6L2Q6UXD5 910 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms