RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DDX17Q92841 729 aaKnown RBP3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 DAZAP1Q96EP5 407 aaKnown RBP3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 VCPIP1Q96JH7 1222 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 TAAR9Q96RI9 348 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 CNPPD1Q9BV87 410 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 C1orf43Q9BWL3 253 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 GPR35Q9HC97 309 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 SARS2Q9NP81 518 aaKnown RBP3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 CNNM1Q9NRU3 951 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 NOB1Q9ULX3 412 aaKnown RBP3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 G3BP2Q9UN86 482 aaKnown RBP3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 SH2B3Q9UQQ2 575 aa3.94□□□□□ -1.78
HDGFL3-202ENST00000562702 POC1B-GALNT4F8VUJ3 575 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 DSCR3O14972 297 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 ERC2O15083 957 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 SLC16A3O15427 465 aaKnown RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 NPSP0C0P6 89 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 HTR1BP28222 390 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 NKX6-1P78426 367 aaPredicted RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 HTRA4P83105 476 aaPredicted RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 ERV3-1Q14264 604 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 PLS1Q14651 629 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 RBMS2Q15434 407 aaKnown RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 MINDY4Q4G0A6 757 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 EMC10Q5UCC4 262 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 LVRNQ6Q4G3 990 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 B3GNT9Q6UX72 402 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 DAAM2Q86T65 1068 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 PPP1R3BQ86XI6 285 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 TCEAL8Q8IYN2 117 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 GALNT4Q8N4A0 578 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 LRRC71Q8N4P6 559 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 MAGEB6Q8N7X4 407 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 ACO2Q99798 780 aaKnown RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 TINAGL1Q9GZM7 467 aaPredicted RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 HIPK2Q9H2X6 1198 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 METTL14Q9HCE5 456 aaKnown RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 DLL3Q9NYJ7 618 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 PI4KBQ9UBF8 816 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 PCDHA1Q9Y5I3 950 aa3.93□□□□□ -1.78
HDGFL3-202ENST00000562702 EME2A4GXA9 379 aaPredicted RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 GOLGA6CA6NDK9 693 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 GOLGA6BA6NDN3 693 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 E9PLN8 166 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 H7C1Q1 480 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 TSPAN6O43657 245 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 CTNND1O60716 968 aaKnown RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 UBXN7O94888 489 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 AHSGP02765 367 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 CHRM5P08912 532 aaPredicted RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 GOLGA6DP0CG33 693 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 T-ENOLP0DO92 83 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 TGFB3P10600 412 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 ATP5F1P24539 256 aaPredicted RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 PHKA1P46020 1223 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 PDE1AP54750 535 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 RAB1AP62820 205 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 FGL2Q14314 439 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 HABP2Q14520 560 aaPredicted RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 TBC1D25Q3MII6 688 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 SFRP4Q6FHJ7 346 aaPredicted RBP3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 Q6ZTC4 211 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 DTX2Q86UW9 622 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 ZBTB34Q8NCN2 500 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 PSD4Q8NDX1 1056 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 CYP2W1Q8TAV3 490 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 VKORC1Q9BQB6 163 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 DUSP22Q9NRW4 184 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 TXLNGQ9NUQ3 528 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 POT1Q9NUX5 634 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 GOLGA6AQ9NYA3 693 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 KLHL13Q9P2N7 655 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 GABBR1Q9UBS5 961 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 PROCRQ9UNN8 238 aa3.92□□□□□ -1.78
HDGFL3-202ENST00000562702 A0A088AWK7 358 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 PRSS29PA6NIE9 313 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 FAM227AF5H4B4 570 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 ENGP17813 658 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 TTC3P53804 2025 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 SOX8P57073 446 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 CYP4F2P78329 520 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 GHRHRQ02643 423 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 EXOSC9Q06265 439 aaKnown RBP3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 ZNF268Q14587 947 aaPredicted RBP3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 MLC1Q15049 377 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 ANO6Q4KMQ2 910 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 KHDC1LQ5JSQ8 128 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 KRT78Q8N1N4 520 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 MYO1HQ8N1T3 1032 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 RUNDC1Q96C34 613 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 FOXP1Q9H334 677 aaPredicted RBP3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 ARMT1Q9H993 441 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 C1orf112Q9NSG2 853 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 KLHL42Q9P2K6 505 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 CCNL1Q9UK58 526 aaPredicted RBP3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 ADAMTS5Q9UNA0 930 aa3.91□□□□□ -1.78
HDGFL3-202ENST00000562702 RAD54BQ9Y620 910 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms