RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C2CD5Q86YS7 1000 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 TMEM57Q8N5G2 664 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 ANKRD44Q8N8A2 993 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 WDR66Q8TBY9 1149 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 CCHCR1Q8TD31 782 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 MASTLQ96GX5 879 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 API5Q9BZZ5 524 aaKnown RBP5.63□□□□□ -1.51
SMG1-206ENST00000562668 DNM3Q9UQ16 869 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 SALL3Q9BXA9 1300 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 ZNF646O15015 1829 aaPredicted RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 H0YIN7 160 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 K7ESF4 209 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 MGST3O14880 152 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 PLIN1O60240 522 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 C1RP00736 705 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 AMY1AP04745 511 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 CKBP12277 381 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 NPR1P16066 1061 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 AGXTP21549 392 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 LMO1P25800 156 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 CCT4P50991 539 aaKnown RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 SIM1P81133 766 aaPredicted RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 ATP8B2P98198 1209 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 RABL6Q3YEC7 729 aaPredicted RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 ZGPATQ8N5A5 531 aaKnown RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 FITM2Q8N6M3 262 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 ACTRT2Q8TDY3 377 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 NUP133Q8WUM0 1156 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 FRAT1Q92837 279 aaPredicted RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 CELF1Q92879 486 aaKnown RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 SUCLG2Q96I99 432 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 MEIS3Q99687 375 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 LRFN3Q9BTN0 628 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 UNKLQ9H9P5 680 aaKnown RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 KIAA1586Q9HCI6 787 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 LRIT1Q9P2V4 623 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 COL4A5P29400 1685 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
SMG1-206ENST00000562668 DICER1Q9UPY3 1922 aaKnown RBP5.62□□□□□ -1.51
SMG1-206ENST00000562668 IPO8O15397 1037 aaKnown RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 ERN1O75460 977 aaKnown RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 DDCP20711 480 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 RFX5P48382 616 aaPredicted RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 NOMO3P69849 1222 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 MRPS35P82673 323 aaKnown RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 GEN1Q17RS7 908 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 NOMO2Q5JPE7 1267 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 RNF219Q5W0B1 726 aaPredicted RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 OLFM4Q6UX06 510 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 COLGALT2Q8IYK4 626 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 MARS2Q96GW9 593 aaKnown RBP5.61□□□□□ -1.51
SMG1-206ENST00000562668 MED15Q96RN5 788 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 PNKPQ96T60 521 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 AIFM2Q9BRQ8 373 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 SPATA5L1Q9BVQ7 753 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 KCTD5Q9NXV2 234 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 DMTF1Q9Y222 760 aa5.61□□□□□ -1.51
SMG1-206ENST00000562668 TIAM2Q8IVF5 1701 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 TCRBV7S2A1N4TA0A589 114 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 MYADML2A6NDP7 307 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 ZFPL1O95159 310 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 RRP1P56182 461 aaKnown RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 MTX1Q13505 466 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 GRAPQ13588 217 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 ATP2B3Q16720 1220 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 DACT2Q5SW24 774 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 AMOTL1Q8IY63 956 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 LNX2Q8N448 690 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 GRAPLQ8TC17 118 aaPredicted RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 SSH3Q8TE77 659 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 ZNF622Q969S3 477 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMG1-206ENST00000562668 PTCD3Q96EY7 689 aaKnown RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 RBM17Q96I25 401 aaKnown RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 C7orf25Q9BPX7 421 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 C11orf54Q9H0W9 315 aaPredicted RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 BICC1Q9H694 974 aaKnown RBP5.6□□□□□ -1.51
SMG1-206ENST00000562668 CHD4Q14839 1912 aa5.6□□□□□ -1.51
SMG1-206ENST00000562668 BBOX1O75936 387 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 HAUS5O94927 633 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 FCER1AP12319 257 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 ALDH1B1P30837 517 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 RARRES1P49788 294 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 CREMQ03060 361 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.51
SMG1-206ENST00000562668 MVPQ14764 893 aaKnown RBP5.59□□□□□ -1.51
SMG1-206ENST00000562668 TBC1D15Q8TC07 691 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 NRG4Q8WWG1 115 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 SLC2A13Q96QE2 648 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 GSTO2Q9H4Y5 243 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 ZBTB40Q9NUA8 1239 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 C9orf78Q9NZ63 289 aaPredicted RBP5.59□□□□□ -1.51
SMG1-206ENST00000562668 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms