RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 MTBPQ96DY7 904 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 TRAIPQ9BWF2 469 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 RNF146Q9NTX7 359 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 TMED5Q9Y3A6 229 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 POLR2AP24928 1970 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 CENPFP49454 3210 aa14.67□□□□□ -0.06
GTF3C1-203ENST00000562609 A0A1W2PPM1 405 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 BIRC5O15392 142 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 CLDN3O15551 220 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 DKC1O60832 514 aaKnown RBP eCLIP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 DNAJC6O75061 913 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 TRIM49P0CI25 452 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 TRIM49CP0CI26 452 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ATP6V1B1P15313 513 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ADRA1DP25100 572 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ARHGEF16Q5VV41 709 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 PLA2G4FQ68DD2 849 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 DHDDSQ86SQ9 333 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ZC3H3Q8IXZ2 948 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 C12orf50Q8NA57 414 aaPredicted RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ZNF280CQ8ND82 737 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 FAM172AQ8WUF8 416 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 PYDC1Q8WXC3 89 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 GFM2Q969S9 779 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 RIT2Q99578 217 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 MKNK1Q9BUB5 465 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 KLHL4Q9C0H6 718 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 FRMPD4Q14CM0 1322 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 RBBP6Q7Z6E9 1792 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 KANSL1LA0AUZ9 987 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 FCHO1O14526 889 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ENO1P06733 434 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 COL6A2P12110 1019 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 HIRAP54198 1017 aaPredicted RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 BTKQ06187 659 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 LPIN1Q14693 890 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 DRAP1Q14919 205 aaPredicted RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 MYLK3Q32MK0 819 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ANKRD20A4Q4UJ75 823 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 FBXL19Q6PCT2 694 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 PATL1Q86TB9 770 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ZSWIM2Q8NEG5 633 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 PIP4K2CQ8TBX8 421 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 PDCD2LQ9BRP1 358 aa14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 RBM38Q9H0Z9 239 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 TUT1Q9H6E5 874 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 ALG13Q9NP73 1137 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 BRCA1P38398 1863 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-203ENST00000562609 E9PBE3 544 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 TRMUO75648 421 aaKnown RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 TM7SF2O76062 418 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SLC5A2P31639 672 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SOX10P56693 466 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SEPT7Q16181 437 aaKnown RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 MDH1BQ5I0G3 518 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 PCNX4Q63HM2 1172 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 NANOGNBQ7Z5D8 188 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 BBS5Q8N3I7 341 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 DEPTORQ8TB45 409 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 GPAMQ9HCL2 828 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 CHST7Q9NS84 486 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 UBAP1Q9NZ09 502 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 DMTF1Q9Y222 760 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 NEU2Q9Y3R4 380 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 UBIAD1Q9Y5Z9 338 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 K7ENM7 598 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 LSM1O15116 133 aaKnown RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SPOPO43791 374 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 TYROBPO43914 113 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 LRRN2O75325 713 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 CCNE2O96020 404 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 GAP43P17677 238 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 PEX2P28328 305 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 RASA2Q15283 850 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 BMT2Q1RMZ1 405 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 ZNF362Q5T0B9 420 aaPredicted RBP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 Q6ZNX1 250 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 CAPN12Q6ZSI9 719 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 FAM186BQ8IYM0 893 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 NMUR2Q9GZQ4 415 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 KCNK13Q9HB14 408 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 PXMP2Q9NR77 195 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 P4HA2O15460 535 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 FKBP6O75344 327 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SERPINB7O75635 380 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 RRM1P23921 792 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 NAA20P61599 178 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 PDE1BQ01064 536 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 CAV1Q03135 178 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 NLRX1Q86UT6 975 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 GDPD5Q8WTR4 605 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SLCO2A1Q92959 643 aa14.65□□□□□ -0.06
GTF3C1-203ENST00000562609 SYT11Q9BT88 431 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms