RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 MRPL46Q9H2W6 279 aaKnown RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 MANSC1Q9H8J5 431 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 TMOD2Q9NZR1 351 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 ATMINO43313 823 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 GCAP28676 217 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 MAN1A1P33908 653 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 EPHX2P34913 555 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 BTDP43251 543 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 BTKQ06187 659 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 PTK6Q13882 451 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 PKN2Q16513 984 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 SGO2Q562F6 1265 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 RNF111Q6ZNA4 994 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 TTC7BQ86TV6 843 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 PPP1R14CQ8TAE6 165 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 TRPC4APQ8TEL6 797 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 CD101Q93033 1021 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 WNT8AQ9H1J5 351 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 VPS11Q9H270 941 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 GIN1Q9NXP7 522 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 TAGLN3Q9UI15 199 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 KIAA1024Q9UPX6 916 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 CAPN14A8MX76 684 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 FAM47E-STBD1D6RA91 191 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 CLDN3O15551 220 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 KRT18P05783 430 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 ENO1P06733 434 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 DLDP09622 509 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 EEF2P13639 858 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 ATF2P15336 505 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 RPS12P25398 132 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 HIC1Q14526 733 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 GRAMD1BQ3KR37 738 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 LZTR1Q8N653 840 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 MORC4Q8TE76 937 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 PRPF18Q99633 342 aaKnown RBP19.43■□□□□ 0.7
RAB40C-206ENST00000561781 HAUS8Q9BT25 410 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 HACL1Q9UJ83 578 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 DTNAQ9Y4J8 743 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 NOX1Q9Y5S8 564 aa19.43■□□□□ 0.7
RAB40C-206ENST00000561781 GTPBP10A4D1E9 387 aaKnown RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 XPOTO43592 962 aaKnown RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 IL23RQ5VWK5 629 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 CYP4F22Q6NT55 531 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 BBOF1Q8ND07 529 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 SLC26A7Q8TE54 656 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 RBM15Q96T37 977 aaKnown RBP eCLIP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 NMUR2Q9GZQ4 415 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 PPCSQ9HAB8 311 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 ZNF287Q9HBT7 754 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 TRNAU1APQ9NX07 287 aaKnown RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 ARMCX1Q9P291 453 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 MYH11P35749 1972 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 SPDYE2BA6NHP3 402 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 DNAJA2O60884 412 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 FTLP02792 175 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 SPDYE6P0CI01 402 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 ZNF280AP59817 542 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 FKBP1AP62942 108 aaKnown RBP19.42■□□□□ 0.7
RAB40C-206ENST00000561781 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 CENPUQ71F23 418 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 CDAN1Q8IWY9 1227 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 GSTCDQ8NEC7 633 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 FBXO27Q8NI29 283 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 ATG4AQ8WYN0 398 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 KLC2Q9H0B6 622 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 VAT1LQ9HCJ6 419 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 CHST7Q9NS84 486 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 POLIQ9UNA4 740 aa19.42■□□□□ 0.7
RAB40C-206ENST00000561781 CALUO43852 315 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-206ENST00000561781 FUCA1P04066 466 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 NR3C1P04150 777 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 PTPN2P17706 415 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 HMOX2P30519 316 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 ADCY8P40145 1251 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 ARL4CP56559 192 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 NFIAQ12857 509 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 TBCCQ15814 346 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 ZNF829Q3KNS6 432 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-206ENST00000561781 ARL13BQ3SXY8 428 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 PRAMEF18Q5VWM3 479 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 SLC7A5P1Q8MH63 180 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 GRK7Q8WTQ7 553 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 SLC38A7Q9NVC3 462 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 RABGAP1Q9Y3P9 1069 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 PCDHB13Q9Y5F0 798 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 TFPTP0C1Z6 253 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 FAM58BPP0C7Q3 252 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 MYBPC1Q00872 1141 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 OGFRL1Q5TC84 451 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-206ENST00000561781 LPCAT2Q7L5N7 544 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 CENPSQ8N2Z9 138 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 BTBD6Q96KE9 485 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
RAB40C-206ENST00000561781 GPBP1L1Q9HC44 474 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-206ENST00000561781 IGSF9Q9P2J2 1179 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms