RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 NELL2Q99435 816 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 DUSP9Q99956 384 aaKnown RBP16.46■□□□□ 0.23
CCDC113-203ENST00000561517 NIF3L1Q9GZT8 377 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.23
CCDC113-203ENST00000561517 EHD2Q9NZN4 543 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 HMGXB4Q9UGU5 601 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 COQ4Q9Y3A0 265 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 BIN1O00499 593 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 MAN2B1O00754 1011 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 DCNP07585 359 aaKnown RBP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 CD72P21854 359 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 ZNF852Q6ZMS4 543 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 CCDC150Q8NCX0 1101 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 SLC35C1Q96A29 364 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 KIF9Q9HAQ2 790 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 TDP1Q9NUW8 608 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 GCNT4Q9P109 453 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 CCL26Q9Y258 94 aa16.45■□□□□ 0.22
CCDC113-203ENST00000561517 MRPS17Q9Y2R5 130 aaKnown RBP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
CCDC113-203ENST00000561517 RIF1Q5UIP0 2472 aaKnown RBP16.44■□□□□ 0.22
CCDC113-203ENST00000561517 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 H0Y858 1186 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CILPO75339 1184 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 PFKLP17858 780 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 TARSP26639 723 aaKnown RBP16.44■□□□□ 0.22
CCDC113-203ENST00000561517 PPP3CCP48454 512 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 UBXN2BQ14CS0 331 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 KLHL10Q6JEL2 608 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 FRMD5Q7Z6J6 570 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 ZNF687Q8N1G0 1237 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 TRIML1Q8N9V2 468 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 CLDN23Q96B33 292 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 SMARCD1Q96GM5 515 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 TWNKQ96RR1 684 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 MED10Q9BTT4 135 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 PIAS3Q9Y6X2 628 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
CCDC113-203ENST00000561517 ATG2BQ96BY7 2078 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 TRAV19A0A0A6YYK7 116 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 BICDL2A1A5D9 508 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 TNFRSF10BO14763 440 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 USP17L7P0C7H9 530 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 CCDC130P13994 396 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 MAGEA9P43362 315 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 ORC1Q13415 861 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 FZD5Q13467 585 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 DCAF17Q5H9S7 520 aaPredicted RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 CSGALNACT1Q8TDX6 532 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 SLC22A12Q96S37 553 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 CYP2S1Q96SQ9 504 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 FAM83CQ9BQN1 747 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 NT5C1AQ9BXI3 368 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 FAM124BQ9H5Z6 455 aaPredicted RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 C8orf33Q9H7E9 229 aaPredicted RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 TRPC7Q9HCX4 862 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 DMAP1Q9NPF5 467 aaPredicted RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 THG1LQ9NWX6 298 aaKnown RBP16.43■□□□□ 0.22
CCDC113-203ENST00000561517 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 TRPM5Q9NZQ8 1165 aa16.43■□□□□ 0.22
CCDC113-203ENST00000561517 MYOFQ9NZM1 2061 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 FAM186AA6NE01 2351 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 C2orf78A6NCI8 922 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 ZNF840PA6NDX5 716 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 PMM2O15305 246 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 NCAM2O15394 837 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 AP1G2O75843 785 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 TCF3P15923 654 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 TRIM21P19474 475 aaKnown RBP16.42■□□□□ 0.22
CCDC113-203ENST00000561517 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
CCDC113-203ENST00000561517 RPS9P46781 194 aaKnown RBP16.42■□□□□ 0.22
CCDC113-203ENST00000561517 TAF10Q12962 218 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 ANGPT1Q15389 498 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 C1orf228Q6PIY5 440 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 TTC39CQ8N584 583 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 ARL14EPQ8N8R7 260 aaPredicted RBP16.42■□□□□ 0.22
CCDC113-203ENST00000561517 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
CCDC113-203ENST00000561517 ZMIZ2Q8NF64 920 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms