RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
CASC4-211ENST00000561305 TBC1D30Q9Y2I9 924 aa4.58□□□□□ -1.68
CASC4-211ENST00000561305 AP1G1O43747 822 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 BCAR3O75815 825 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 UBXN7O94888 489 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 BMP15O95972 392 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 CHRM5P08912 532 aaPredicted RBP4.57□□□□□ -1.68
CASC4-211ENST00000561305 MYCLP12524 364 aaPredicted RBP4.57□□□□□ -1.68
CASC4-211ENST00000561305 NPR1P16066 1061 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 HTR1BP28222 390 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 MCL1Q07820 350 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 LMBRD2Q68DH5 695 aaPredicted RBP4.57□□□□□ -1.68
CASC4-211ENST00000561305 SLC15A4Q8N697 577 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 PDGFCQ9NRA1 345 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 TRMT13Q9NUP7 481 aaKnown RBP4.57□□□□□ -1.68
CASC4-211ENST00000561305 TUBA8Q9NY65 449 aaPredicted RBP4.57□□□□□ -1.68
CASC4-211ENST00000561305 SNX14Q9Y5W7 946 aa4.57□□□□□ -1.68
CASC4-211ENST00000561305 WDR17Q8IZU2 1322 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 TCRBV5S1A1TA0A578 114 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 E2F8A0AVK6 867 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 KCNU1A8MYU2 1149 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 CT47B1P0C2W7 299 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 HSPA6P17066 643 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 IBSPP21815 317 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 NR4A2P43354 598 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 RENBPP51606 427 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 KRT17Q04695 432 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 CTBP1Q13363 440 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 PIN1Q13526 163 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 LAMB3Q13751 1172 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 TTF1Q15361 905 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 TRIP6Q15654 476 aaKnown RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 LY6KQ17RY6 165 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 RNASE12Q5GAN4 147 aaKnown RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 L1TD1Q5T7N2 865 aaKnown RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 ZNF783Q6ZMS7 281 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 CAND1Q86VP6 1230 aaKnown RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 SLC35G2Q8TBE7 412 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 ZC3H10Q96K80 434 aaKnown RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 CAMKK2Q96RR4 588 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 SPRTNQ9H040 489 aaPredicted RBP4.56□□□□□ -1.68
CASC4-211ENST00000561305 SMURF2Q9HAU4 748 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 NMRK2Q9NPI5 230 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 CACNA1IQ9P0X4 2223 aa4.56□□□□□ -1.68
CASC4-211ENST00000561305 E5RJQ4 531 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 UBE2Q2LH0YL09 131 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 BTN3A1O00481 513 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 EXOC3O60645 756 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 USP1O94782 785 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 VNN1O95497 513 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 CYP2A6P11509 494 aaPredicted RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 FPR3P25089 353 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 MMP13P45452 471 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 AGFG1P52594 562 aaKnown RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 E2F1Q01094 437 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 CERKLQ49MI3 558 aaPredicted RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 PLA1AQ53H76 456 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 MIS18BP1Q6P0N0 1132 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 DAAM2Q86T65 1068 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 KRT73Q86Y46 540 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 OR6B3Q8NGW1 331 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 PPP1R35Q8TAP8 253 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 BPIFB1Q8TDL5 484 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 PPP2R3CQ969Q6 453 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 NT5C1BQ96P26 610 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 PRR25Q96S07 402 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 RTFDC1Q9BY42 306 aaPredicted RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 CIPCQ9C0C6 399 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 VPS16Q9H269 839 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 ZMAT3Q9HA38 289 aaKnown RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 ELOVL5Q9NYP7 299 aa4.55□□□□□ -1.68
CASC4-211ENST00000561305 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.55□□□□□ -1.68
CASC4-211ENST00000561305 A0A1W2PPL8 197 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 AP4M1O00189 453 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 AKAP10O43572 662 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 ARHGAP25P42331 645 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 ZNF813Q6ZN06 617 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 DPY19L3Q6ZPD9 716 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 BCDIN3DQ7Z5W3 292 aaKnown RBP4.54□□□□□ -1.68
CASC4-211ENST00000561305 SFTPA1Q8IWL2 248 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 ADAMTS18Q8TE60 1221 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 JPH3Q8WXH2 748 aaPredicted RBP4.54□□□□□ -1.68
CASC4-211ENST00000561305 TAAR9Q96RI9 348 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 ACO2Q99798 780 aaKnown RBP4.54□□□□□ -1.68
CASC4-211ENST00000561305 C17orf80Q9BSJ5 609 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 MS4A7Q9GZW8 240 aaPredicted RBP4.54□□□□□ -1.68
CASC4-211ENST00000561305 AMFRQ9UKV5 643 aa4.54□□□□□ -1.68
CASC4-211ENST00000561305 SCAF8Q9UPN6 1271 aaKnown RBP4.54□□□□□ -1.68
CASC4-211ENST00000561305 FER1L4A9Z1Z3 1794 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 BTBD19C9JJ37 291 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 FCHO1O14526 889 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 PHGDHO43175 533 aaKnown RBP4.53□□□□□ -1.68
CASC4-211ENST00000561305 RFPL1O75677 317 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 TUSC2O75896 110 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 FGAP02671 866 aa4.53□□□□□ -1.68
CASC4-211ENST00000561305 KITP10721 976 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms