RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 GRM2Q14416 872 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 VEPH1Q14D04 833 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 KNOP1Q1ED39 458 aaKnown RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 FOXD4L6Q3SYB3 417 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 ZCWPW2Q504Y3 356 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 TAF3Q5VWG9 929 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 LMBRD2Q68DH5 695 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 FOXD4L3Q6VB84 417 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 HS2ST1Q7LGA3 356 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 TRAPPC11Q7Z392 1133 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 METTL23Q86XA0 190 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 ARID3BQ8IVW6 561 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 DRC7Q8IY82 874 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DCP1BQ8IZD4 617 aaKnown RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 THEM5Q8N1Q8 247 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 FSIP1Q8NA03 581 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 XXYLT1Q8NBI6 393 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 ST13P5Q8NFI4 369 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 KIF18AQ8NI77 898 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 RIN3Q8TB24 985 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 ATOH1Q92858 354 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 NELL2Q99435 816 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 TRMT61BQ9BVS5 477 aaKnown RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 TTLL2Q9BWV7 592 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 PCIF1Q9H4Z3 704 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 TASP1Q9H6P5 420 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 HEBP1Q9NRV9 189 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DDX43Q9NXZ2 648 aaKnown RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 ABI2Q9NYB9 513 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 OGFRQ9NZT2 677 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DACH1Q9UI36 760 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 CDH9Q9ULB4 789 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 PYCARDQ9ULZ3 195 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 MTF2Q9Y483 593 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 PCDHB5Q9Y5E4 795 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DMXL1Q9Y485 3027 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 MAN2B1O00754 1011 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 HCRTO43612 131 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 HUS1O60921 280 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 TNNC2P02585 160 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SP9P0CG40 484 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CHRNB1P11230 501 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 TNNT1P13805 278 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 PFKLP17858 780 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CTHP32929 405 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 VIPR2P41587 438 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CYP4F8P98187 520 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 PLCB2Q00722 1185 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 DPYDQ12882 1025 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 MYO1EQ12965 1108 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 STK4Q13043 487 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 PSMD2Q13200 908 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CCINQ13939 588 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 ZNF77Q15935 545 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CAMK4Q16566 473 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 DUOXA2Q1HG44 320 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 MGAT5BQ3V5L5 792 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 ARHGAP29Q52LW3 1261 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 VSTM1Q6UX27 236 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 ZNF852Q6ZMS4 543 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 FRMD5Q7Z6J6 570 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 GRAMD1CQ8IYS0 662 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CMTM8Q8IZV2 173 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 CCAR2Q8N163 923 aaKnown RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SUMF1Q8NBK3 374 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 GOLGA5Q8TBA6 731 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 PARD3BQ8TEW8 1205 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 NKD2Q969F2 451 aaPredicted RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 PAGE5Q96GU1 130 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 HPDLQ96IR7 371 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SPATA17Q96L03 361 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SEPT5Q99719 369 aaPredicted RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 FAM83CQ9BQN1 747 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SYT15Q9BQS2 421 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 BLZF1Q9H2G9 400 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 C8orf33Q9H7E9 229 aaPredicted RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 BRD9Q9H8M2 597 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 TMEM30AQ9NV96 361 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 GCNT4Q9P109 453 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 UXTQ9UBK9 157 aaPredicted RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 TRAF3IP3Q9Y228 551 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 MRPS17Q9Y2R5 130 aaKnown RBP7.35□□□□□ -1.23
SPG11-224ENST00000561268 SNX9Q9Y5X1 595 aa7.35□□□□□ -1.23
SPG11-224ENST00000561268 GOLGA8CPA6NN73 597 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 LRRIQ3A6PVS8 624 aaPredicted RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 PDXKO00764 312 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ZNF263O14978 683 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 VNN1O95497 513 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 C4BPAP04003 597 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 SKILP12757 684 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 CD72P21854 359 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ACAT1P24752 427 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 GDI1P31150 447 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ATICP31939 592 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms