RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ARL4AP40617 200 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 BUD31P41223 144 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 SLC6A11P48066 632 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PREPP48147 710 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SMCPP49901 116 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 LIG4P49917 911 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ALDH3A2P51648 485 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CCR5P51681 352 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CLCN2P51788 898 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CDH15P55291 814 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 HSD17B7P56937 341 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CTXN1P60606 82 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PTH1RQ03431 593 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PPP3CAQ08209 521 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DBPQ10586 325 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 COASYQ13057 564 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TARDBPQ13148 414 aaKnown RBP eCLIP2.2□□□□□ -2.06
RTF1-207ENST00000561076 CBX3Q13185 183 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PDCLQ13371 301 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ADAM9Q13443 819 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CAMK2DQ13557 499 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TDGQ13569 410 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 KCNB1Q14721 858 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TAF7Q15545 349 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 SLC5A9Q2M3M2 681 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ZNF674Q2M3X9 581 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 BTBD16Q32M84 506 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 MGAT5BQ3V5L5 792 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DUSP28Q4G0W2 176 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 EMC4Q5J8M3 183 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SLC10A5Q5PT55 438 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TEX35Q5T0J7 233 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TMTC4Q5T4D3 741 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 IFFO2Q5TF58 517 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LIPMQ5VYY2 423 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 VASNQ6EMK4 673 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LIN54Q6MZP7 749 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CDPF1Q6NVV7 123 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 GALNT18Q6P9A2 607 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ZPBP2Q6X784 338 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 C22orf34Q6ZV56 151 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 RTL10Q7L3V2 364 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 OTOP2Q7RTS6 562 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TMPRSS7Q7RTY8 843 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 BMP8AQ7Z5Y6 402 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 ADGRG6Q86SQ4 1221 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SLC9B2Q86UD5 537 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DNAAF5Q86Y56 855 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 IRF2BP1Q8IU81 584 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 RHPN2Q8IUC4 686 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CCDC28AQ8IWP9 274 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SCN4BQ8IWT1 228 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TRMT2AQ8IZ69 625 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 FMR1NBQ8N0W7 255 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 Q8N1Y9 231 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 FRMD1Q8N878 549 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 POGLUT1Q8NBL1 392 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LSM14AQ8ND56 463 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 NUP43Q8NFH3 380 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 NLGN4YQ8NFZ3 816 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 OR10H5Q8NGA6 315 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 OR6J1Q8NGC5 347 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 OR2I1PQ8NGU4 316 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SPATA18Q8TC71 538 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PLEKHO2Q8TD55 490 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ABHD5Q8WTS1 349 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 EDARADDQ8WWZ3 215 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 RSC1A1Q92681 617 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 BICD1Q96G01 975 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PEX11GQ96HA9 241 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 MRGPRX4Q96LA9 322 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D32Q96NH3 1257 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 FAM118BQ9BPY3 351 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 FERMT1Q9BQL6 677 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TTPALQ9BTX7 342 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ITPAQ9BY32 194 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TRIM6Q9C030 488 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 INTS2Q9H0H0 1204 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 C11orf54Q9H0W9 315 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 EPC1Q9H2F5 836 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TNMDQ9H2S6 317 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 RNPEPQ9H4A4 650 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 THAP9Q9H5L6 903 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TTC12Q9H892 705 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 AKTIPQ9H8T0 292 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 BCO1Q9HAY6 547 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SPON1Q9HCB6 807 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ATP13A2Q9NQ11 1180 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LIN7CQ9NUP9 197 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 TBCCD1Q9NVR7 557 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 POLR3BQ9NW08 1133 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 ERVK13-1Q9NX77 482 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SIDT1Q9NXL6 827 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 PLA2G3Q9NZ20 509 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CWC15Q9P013 229 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 BTBD7Q9P203 1132 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TBK1Q9UHD2 729 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DNAI1Q9UI46 699 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms