RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OTUD4Q01804 1114 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 GCNT1Q02742 428 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 SMTNL2Q2TAL5 461 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 FAM91A1Q658Y4 838 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 PLEKHA7Q6IQ23 1121 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 NAT8LQ8N9F0 302 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 ACTL9Q8TC94 416 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 FAM213AQ9BRX8 229 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 CCDC106Q9BWC9 280 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 IP6K2Q9UHH9 426 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 AGTPBP1Q9UPW5 1226 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 TCRBV9S1A1TA0A576 114 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 GNA15P30679 374 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 SOX10P56693 466 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 CYP24A1Q07973 514 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
TPM1-228ENST00000560975 PLA2G4FQ68DD2 849 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 FBXL19Q6PCT2 694 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 CFAP36Q96G28 342 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 TBX20Q9UMR3 447 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 ZNF252P-AS1Q0IIN9 211 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 TFDP3Q5H9I0 405 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 PLEKHG4BQ96PX9 1271 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 C20orf27Q9GZN8 174 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 TMEM165Q9HC07 324 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 PARVAQ9NVD7 372 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 SCINQ9Y6U3 715 aa17.21■□□□□ 0.35
TPM1-228ENST00000560975 MYH9P35579 1960 aaKnown RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 JAG1P78504 1218 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 SLC18A2Q05940 514 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 DOK7Q18PE1 504 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 DCUN1D2Q6PH85 259 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 PCGF5Q86SE9 256 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 NKD2Q969F2 451 aaPredicted RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 SOX13Q9UN79 622 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 NFASCO94856 1347 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 SRCAPQ6ZRS2 3230 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 AVILO75366 819 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 TMCC1O94876 653 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 MAPTP10636 758 aaKnown RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 CHN2P52757 468 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 OGDHQ02218 1023 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 BMPR2Q13873 1038 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 KCNT1Q5JUK3 1230 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 NUDCD3Q8IVD9 361 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 RBM12BQ8IXT5 1001 aaKnown RBP17.2■□□□□ 0.34
TPM1-228ENST00000560975 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
TPM1-228ENST00000560975 C15orf38-AP3S2A0A0A6YYH1 394 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 SMIM31A0A1B0GVY4 71 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 P4HBP07237 508 aaKnown RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 ATP6V1B1P15313 513 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 CDKN2BP42772 138 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 CCNIQ14094 377 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 WDR44Q5JSH3 913 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 TCHHL1Q5QJ38 904 aaPredicted RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 SLC39A4Q6P5W5 647 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 DENND5BQ6ZUT9 1274 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 ARPINQ7Z6K5 226 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 ZNF677Q86XU0 584 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 CRLF3Q8IUI8 442 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 UNC45BQ8IWX7 931 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 ABRAQ8N0Z2 381 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 FAM71DQ8N9W8 422 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 SLC35B2Q8TB61 432 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 SLC44A1Q8WWI5 657 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 APOL6Q9BWW8 343 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 ZDHHC7Q9NXF8 308 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 WEE2P0C1S8 567 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 TNNI1P19237 187 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 CPOXP36551 454 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 FOLH1Q04609 750 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 PEX6Q13608 980 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 GRM2Q14416 872 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 ABCB5Q2M3G0 1257 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 ENOSF1Q7L5Y1 443 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 DGCR14Q96DF8 476 aaKnown RBP17.19■□□□□ 0.34
TPM1-228ENST00000560975 PHF12Q96QT6 1004 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 EXOC7Q9UPT5 735 aa17.19■□□□□ 0.34
TPM1-228ENST00000560975 VILLO15195 856 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 CST8O60676 142 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 ATP6V1G1O75348 118 aa17.18■□□□□ 0.34
TPM1-228ENST00000560975 GH2P01242 217 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms