RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 WDR59Q6PJI9 974 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 KCNT2Q6UVM3 1135 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 TMC6Q7Z403 805 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 TMCO2Q7Z6W1 182 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 DDX53Q86TM3 631 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 NLRP8Q86W28 1048 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 TMEM173Q86WV6 379 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 CNGA4Q8IV77 575 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 PDCL2Q8N4E4 241 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 COLGALT1Q8NBJ5 622 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 OR8K1Q8NGG5 319 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 BCL7CQ8WUZ0 217 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 DDX1Q92499 740 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 IGSF21Q96ID5 467 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 SENP8Q96LD8 212 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ZNF558Q96NG5 402 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 PKMYT1Q99640 499 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ARID3AQ99856 593 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 RTP3Q9BQQ7 232 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 VN1R3Q9BXE9 311 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 GPR62Q9BZJ7 368 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 IMPG2Q9BZV3 1241 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 RAB6BQ9NRW1 208 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 CISHQ9NSE2 258 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ADAM28Q9UKQ2 775 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 DSEQ9UL01 958 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 KIAA1257Q9ULG3 409 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 BARX2Q9UMQ3 279 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 NENFQ9UMX5 172 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 POLIQ9UNA4 740 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 LZTS1Q9Y250 596 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 FAN1Q9Y2M0 1017 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 LUC7L2Q9Y383 392 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 NME7Q9Y5B8 376 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 SCN1AP35498 2009 aa5.84□□□□□ -1.48
ZEB1-220ENST00000560909 TRIP11Q15643 1979 aa5.84□□□□□ -1.48
ZEB1-220ENST00000560909 TRIOBPQ9H2D6 2365 aa5.84□□□□□ -1.48
ZEB1-220ENST00000560909 SF3B1O75533 1304 aaKnown RBP eCLIP5.83□□□□□ -1.483e-9■■■■■ 206.8
ZEB1-220ENST00000560909 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 LINC01553A4QN01 128 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 AKR1B15C9JRZ8 316 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 F8W810 466 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PES1O00541 588 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 CYB561D2O14569 222 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 TRAPPC3O43617 180 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 HUS1O60921 280 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 GFPT2O94808 682 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 KRT19P08727 400 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 WEE2P0C1S8 567 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FERP16591 822 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 KRT9P35527 623 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SOX5P35711 763 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PPM1AP35813 382 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 BMPR1AP36894 532 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 GRIK1P39086 918 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 STAT1P42224 750 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 LHX1P48742 406 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ALDH7A1P49419 539 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 RAD23BP54727 409 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 BPIFB4P59827 614 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 YWHAEP62258 255 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SMAD3P84022 425 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 UBE3AQ05086 875 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 CCDC173Q0VFZ6 552 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 KIAA0319Q5VV43 1072 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 WSCD1Q658N2 575 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FAM109BQ6ICB4 259 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM214Q6NUQ4 689 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FUT10Q6P4F1 479 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FAM171BQ6P995 826 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 RRAGAQ7L523 313 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PPFIBP1Q86W92 1011 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 OSTM1Q86WC4 334 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM139Q8IV31 216 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PPM1KQ8N3J5 372 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FIBCD1Q8N539 461 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SLC4A11Q8NBS3 891 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 CCDC150Q8NCX0 1101 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 APPL2Q8NEU8 664 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF397Q8NF99 534 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SLC30A5Q8TAD4 765 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 PIK3R5Q8WYR1 880 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ELMO3Q96BJ8 720 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 RNPC3Q96LT9 517 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SAMD11Q96NU1 681 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 FAM193BQ96PV7 902 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 TWNKQ96RR1 684 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 YME1L1Q96TA2 773 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ACBD6Q9BR61 282 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 MRPL45Q9BRJ2 306 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 HERC2P3Q9BVR0 1158 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 UBE2OQ9C0C9 1292 aaKnown RBP5.83□□□□□ -1.48
ZEB1-220ENST00000560909 ELOVL4Q9GZR5 314 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SMYD3Q9H7B4 428 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 RXFP1Q9HBX9 757 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 SPG21Q9NZD8 308 aa5.83□□□□□ -1.48
ZEB1-220ENST00000560909 CACNG4Q9UBN1 327 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms