RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 LMBRD2Q68DH5 695 aaPredicted RBP17.82■□□□□ 0.44
HERC1-207ENST00000560316 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 RAB44Q7Z6P3 723 aaPredicted RBP17.82■□□□□ 0.44
HERC1-207ENST00000560316 FILIP1Q7Z7B0 1213 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 PDZD3Q86UT5 571 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 OSTM1Q86WC4 334 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 PGBD3Q8N328 593 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 FAM184AQ8NB25 1140 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 IKZF4Q9H2S9 585 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 ZHX3Q9H4I2 956 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 PARVGQ9HBI0 331 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 AGO2Q9UKV8 859 aaKnown RBP17.82■□□□□ 0.44
HERC1-207ENST00000560316 SLC6A14Q9UN76 642 aa17.82■□□□□ 0.44
HERC1-207ENST00000560316 SMG1Q96Q15 3661 aaKnown RBP17.82■□□□□ 0.44
HERC1-207ENST00000560316 GCN1Q92616 2671 aaKnown RBP17.81■□□□□ 0.44
HERC1-207ENST00000560316 TCRBV21S2A2A0A5A6 115 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 VWA3AA6NCI4 1184 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 MYMKA6NI61 221 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 ADAM23O75077 832 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 POLR2BP30876 1174 aaKnown RBP17.81■□□□□ 0.44
HERC1-207ENST00000560316 ZNF131P52739 623 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 WNT7BP56706 349 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 GFPT1Q06210 699 aaPredicted RBP17.81■□□□□ 0.44
HERC1-207ENST00000560316 DUOXA1Q1HG43 343 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 COL28A1Q2UY09 1125 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 SPDYCQ5MJ68 293 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 CRELD2Q6UXH1 353 aaPredicted RBP17.81■□□□□ 0.44
HERC1-207ENST00000560316 C12orf40Q86WS4 652 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 SPATA2LQ8IUW3 424 aaPredicted RBP17.81■□□□□ 0.44
HERC1-207ENST00000560316 MINDY1Q8N5J2 469 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 KCTD17Q8N5Z5 321 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 SPATA18Q8TC71 538 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 FIZ1Q96SL8 496 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 PNKPQ96T60 521 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 LIMCH1Q9UPQ0 1083 aa17.81■□□□□ 0.44
HERC1-207ENST00000560316 HELZP42694 1942 aaKnown RBP17.8■□□□□ 0.44
HERC1-207ENST00000560316 HUS1O60921 280 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 KAT7O95251 611 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 CD59P13987 128 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 SCP2P22307 547 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 PNPLA4P41247 253 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 DPP6P42658 865 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 HMGN5P82970 282 aaKnown RBP17.8■□□□□ 0.44
HERC1-207ENST00000560316 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
HERC1-207ENST00000560316 GTF2BQ00403 316 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 MYL7Q01449 175 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 KDSRQ06136 332 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 DHCR24Q15392 516 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 ZNF423Q2M1K9 1284 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 EOGTQ5NDL2 527 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 ADGRG2Q8IZP9 1017 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 FAM84AQ96KN4 292 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 CAMK1GQ96NX5 476 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 CAPN10Q9HC96 672 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 AGAP1Q9UPQ3 857 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 STYXL1Q9Y6J8 313 aa17.8■□□□□ 0.44
HERC1-207ENST00000560316 IGSF10Q6WRI0 2623 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 APODP05090 189 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 ITGB3P05106 788 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 SERPINF2P08697 491 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 HOXD12P35452 270 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 KIR2DL1P43626 348 aaPredicted RBP17.79■□□□□ 0.44
HERC1-207ENST00000560316 USP46P62068 366 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 TFAMQ00059 246 aaKnown RBP17.79■□□□□ 0.44
HERC1-207ENST00000560316 RPL6Q02878 288 aaKnown RBP17.79■□□□□ 0.44
HERC1-207ENST00000560316 BYSLQ13895 437 aaKnown RBP17.79■□□□□ 0.44
HERC1-207ENST00000560316 CFAP221Q4G0U5 840 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 SLFN12LQ6IEE8 588 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 CEP76Q8TAP6 659 aa17.79■□□□□ 0.44
HERC1-207ENST00000560316 PLXND1Q9Y4D7 1925 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 AP5Z1O43299 807 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 ATP2C2O75185 946 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 IL18RAPO95256 599 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 KRT18P05783 430 aaKnown RBP17.78■□□□□ 0.44
HERC1-207ENST00000560316 PDE6CP51160 858 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 RESTQ13127 1097 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 HSF5Q4G112 596 aaPredicted RBP17.78■□□□□ 0.44
HERC1-207ENST00000560316 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 TMEM86AQ8N2M4 240 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 PNPLA1Q8N8W4 532 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 POMGNT1Q8WZA1 660 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 FUBP3Q96I24 572 aaKnown RBP eCLIP17.78■□□□□ 0.44
HERC1-207ENST00000560316 RNF38Q9H0F5 515 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 ARHGEF4Q9NR80 690 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 CPQQ9Y646 472 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 PCDH15Q96QU1 1955 aa17.78■□□□□ 0.44
HERC1-207ENST00000560316 SETXQ7Z333 2677 aaKnown RBP17.78■□□□□ 0.44
HERC1-207ENST00000560316 MYOFQ9NZM1 2061 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 ARHGAP33O14559 1287 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 SH3BP5O60239 455 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 ZIC2O95409 532 aaPredicted RBP17.77■□□□□ 0.44
HERC1-207ENST00000560316 PLCG1P19174 1290 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 ADSSP30520 456 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 ZNF33AQ06730 810 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 MCM6Q14566 821 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 TRIP6Q15654 476 aaKnown RBP17.77■□□□□ 0.44
HERC1-207ENST00000560316 NT5DC4Q86YG4 428 aa17.77■□□□□ 0.44
HERC1-207ENST00000560316 ADGRF2Q8IZF7 708 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms