RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TRPC7Q9HCX4 862 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 FAM49BQ9NUQ9 324 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 UXTQ9UBK9 157 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 DMDP11532 3685 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 FAM170BA6NMN3 283 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 DPYSL4O14531 572 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TRIM66O15016 1216 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 CHADO15335 359 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 BEST1O76090 585 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 CD58P19256 250 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 AVPR1AP37288 418 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 NUBP1P53384 320 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 STX17P56962 302 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 INCA1Q0VD86 236 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 IFRD2Q12894 506 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 FZD5Q13467 585 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 STIM1Q13586 685 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 DENND5BQ6ZUT9 1274 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 CRYBG2Q8N1P7 616 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 CELF5Q8N6W0 485 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 SCAMP5Q8TAC9 235 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 SLC2A14Q8TDB8 520 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 BPIFB1Q8TDL5 484 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TATDN2Q93075 761 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 SLC35C1Q96A29 364 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TNIP3Q96KP6 325 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 MED10Q9BTT4 135 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TTLL2Q9BWV7 592 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 LTB4R2Q9NPC1 389 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 TDP1Q9NUW8 608 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 OBP2AQ9NY56 170 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 GCNT4Q9P109 453 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 ARMCX3Q9UH62 379 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 USP34Q70CQ2 3546 aa12.38□□□□□ -0.43
RABGGTA-216ENST00000560243 AP1G2O75843 785 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 DDX6P26196 483 aaKnown RBP eCLIP12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 TAF10Q12962 218 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 ARHGAP29Q52LW3 1261 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 UNC93AQ86WB7 457 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 ARL14EPQ8N8R7 260 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 TTC16Q8NEE8 873 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 ZMIZ2Q8NF64 920 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 SMOQ99835 787 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 CYP3A43Q9HB55 503 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 GKN1Q9NS71 199 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 NDRG2Q9UN36 371 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 RIF1Q5UIP0 2472 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-216ENST00000560243 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 OTOL1A6NHN0 477 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 STX10O60499 249 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 CILPO75339 1184 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 CKMP06732 381 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ADORA2BP29275 332 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 PGFP49763 221 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ZXDBP98169 803 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 WDR44Q5JSH3 913 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ATOH1Q92858 354 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 MED15Q96RN5 788 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 DMAP1Q9NPF5 467 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 TRPM5Q9NZQ8 1165 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ZMYM5Q9UJ78 669 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 COQ4Q9Y3A0 265 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 PATJQ8NI35 1801 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
RABGGTA-216ENST00000560243 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 ABL1P00519 1130 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 ARSAP15289 507 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 HDCP19113 662 aa12.35□□□□□ -0.43
RABGGTA-216ENST00000560243 PPP1R2P41236 205 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms