RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 CAPZA3Q96KX2 299 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 KCNK16Q96T55 309 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 COLEC11Q9BWP8 271 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 METTL5Q9NRN9 209 aaKnown RBP15.07■□□□□ 0
RABGGTA-209ENST00000559551 KRT82Q9NSB4 513 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 AMFRQ9UKV5 643 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 SCINQ9Y6U3 715 aa15.07■□□□□ 0
RABGGTA-209ENST00000559551 GBF1Q92538 1859 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 MYO16Q9Y6X6 1858 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 SIGLEC16A6NMB1 481 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 HHLA1C9JL84 531 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 BAIAP3O94812 1187 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 PROSCO94903 275 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 NPR3P17342 541 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 PEX5P50542 639 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
RABGGTA-209ENST00000559551 RPS6KA1Q15418 735 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 TMEM240Q5SV17 173 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 GPRIN1Q7Z2K8 1008 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
RABGGTA-209ENST00000559551 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 04e-7■■□□□ 11.9
RABGGTA-209ENST00000559551 MRPL47Q9HD33 250 aaKnown RBP15.06■□□□□ 0
RABGGTA-209ENST00000559551 TMEM59LQ9UK28 342 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 STRIP2Q9ULQ0 834 aa15.06■□□□□ 0
RABGGTA-209ENST00000559551 MRPL42Q9Y6G3 142 aaKnown RBP15.06■□□□□ 0
RABGGTA-209ENST00000559551 XPO1O14980 1071 aaKnown RBP15.05■□□□□ 0
RABGGTA-209ENST00000559551 SYN3O14994 580 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 TBC1D4O60343 1298 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 LINC00271P0C7V0 271 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 MAP3K7CLP57077 242 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 TAS2R40P59535 323 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 ARFGAP1Q8N6T3 406 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 NDRG1Q92597 394 aaKnown RBP15.05■□□□□ 0
RABGGTA-209ENST00000559551 CALR3Q96L12 384 aaKnown RBP15.05■□□□□ 0
RABGGTA-209ENST00000559551 MED10Q9BTT4 135 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 ZCWPW1Q9H0M4 648 aa15.05■□□□□ 0
RABGGTA-209ENST00000559551 F8VP50 259 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 MYO1FO00160 1098 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 KRT3P12035 628 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 NDUFV1P49821 464 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 FPGSQ05932 587 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 ADCY1Q08828 1119 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 RAB6CQ53S08 254 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 OR6B2Q6IFH4 312 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 AADACL2Q6P093 401 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 CEP57Q86XR8 500 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 RAB6CQ9H0N0 254 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 SYNCQ9H7C4 482 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
RABGGTA-209ENST00000559551 WDR35Q9P2L0 1181 aa15.05■□□□□ -0
RABGGTA-209ENST00000559551 COL4A4P53420 1690 aaPredicted RBP15.05■□□□□ -0
RABGGTA-209ENST00000559551 CCDC66A2RUB6 948 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 KCNK3O14649 394 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 TRAPPC3O43617 180 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 GRAP2O75791 330 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 AP1G2O75843 785 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 SLU7O95391 586 aaKnown RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 VNN2O95498 520 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 TCP1P17987 556 aaKnown RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 BDNFP23560 247 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 FLT3P36888 993 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 PPIGQ13427 754 aaKnown RBP eCLIP15.04■□□□□ -01e-7■■■□□ 17
RABGGTA-209ENST00000559551 FAM102AQ5T9C2 384 aaPredicted RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 THEM5Q8N1Q8 247 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 IPO4Q8TEX9 1081 aaKnown RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 IGSF21Q96ID5 467 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 ADAM33Q9BZ11 813 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 MIS12Q9H081 205 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 CSNK1G1Q9HCP0 422 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 CHD7Q9P2D1 2997 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 RANBP2P49792 3224 aaKnown RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 SF3B1O75533 1304 aaKnown RBP eCLIP15.04■□□□□ -08e-6■■■■■ 107
RABGGTA-209ENST00000559551 EFCAB14O75071 495 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 FGBP02675 491 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 FAM200BP0CF97 657 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 LCP1P13796 627 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 WHAMMP3Q1A5X7 153 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 KCNT2Q6UVM3 1135 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 PRSS55Q6UWB4 352 aaPredicted RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 CMTR2Q8IYT2 770 aaKnown RBP15.04■□□□□ -0
RABGGTA-209ENST00000559551 HSFY1Q96LI6 401 aa15.04■□□□□ -0
RABGGTA-209ENST00000559551 ARHGEF37A1IGU5 675 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 TADA3O75528 432 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 CTNNA2P26232 953 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 CTNNA1P35221 906 aaKnown RBP15.03■□□□□ -0
RABGGTA-209ENST00000559551 RGS19P49795 217 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 HTRA4P83105 476 aaPredicted RBP15.03■□□□□ -0
RABGGTA-209ENST00000559551 SLC6A3Q01959 620 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 ADIGQ0VDE8 80 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 RAB41Q5JT25 222 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 SH3PXD2AQ5TCZ1 1133 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 TXNRD3NBQ6F5E7 133 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 DCUN1D2Q6PH85 259 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 SLC39A11Q8N1S5 342 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 MSANTD4Q8NCY6 345 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 KCTD13Q8WZ19 329 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 SMARCD1Q96GM5 515 aa15.03■□□□□ -0
RABGGTA-209ENST00000559551 CYLDQ9NQC7 956 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms