RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.54
SPG11-216ENST00000559347 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 CCL26Q9Y258 94 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 PIAS3Q9Y6X2 628 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 F5P12259 2224 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 ATP8B3O60423 1300 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 TARSP26639 723 aaKnown RBP11.64□□□□□ -0.55
SPG11-216ENST00000559347 PPP1R2P41236 205 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 USP4Q13107 963 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 ORC1Q13415 861 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 MORC3Q14149 939 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 ZNF268Q14587 947 aaPredicted RBP11.64□□□□□ -0.55
SPG11-216ENST00000559347 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 DCAF17Q5H9S7 520 aaPredicted RBP11.64□□□□□ -0.55
SPG11-216ENST00000559347 TCERG1LQ5VWI1 586 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 PAQR9Q6ZVX9 377 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 MON1AQ86VX9 555 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 UNC93AQ86WB7 457 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 FUKQ8N0W3 1084 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 CELF5Q8N6W0 485 aaKnown RBP11.64□□□□□ -0.55
SPG11-216ENST00000559347 FBXL13Q8NEE6 735 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 RIN3Q8TB24 985 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 SEMA4DQ92854 862 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 SMARCD1Q96GM5 515 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 ZFYVE19Q96K21 471 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 SLC22A12Q96S37 553 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 TRPC7Q9HCX4 862 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 KRT82Q9NSB4 513 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 MTF2Q9Y483 593 aaPredicted RBP11.64□□□□□ -0.55
SPG11-216ENST00000559347 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
SPG11-216ENST00000559347 CFAP54Q96N23 3096 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 C2orf78A6NCI8 922 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 BIN1O00499 593 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 STX10O60499 249 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CCDC130P13994 396 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 MLLT6P55198 1093 aaPredicted RBP11.63□□□□□ -0.55
SPG11-216ENST00000559347 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CBWD6Q4V339 395 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CBWD3Q5JTY5 395 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CBWD5Q5RIA9 395 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 TTI2Q6NXR4 508 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 FOXR2Q6PJQ5 311 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 ZNF852Q6ZMS4 543 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CRYBG2Q8N1P7 616 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CCDC150Q8NCX0 1101 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CSGALNACT1Q8TDX6 532 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 SLC35C1Q96A29 364 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 MSANTD3Q96H12 275 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 DHTKD1Q96HY7 919 aaPredicted RBP11.63□□□□□ -0.55
SPG11-216ENST00000559347 TWNKQ96RR1 684 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 DUSP9Q99956 384 aaKnown RBP11.63□□□□□ -0.55
SPG11-216ENST00000559347 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 IRF2BPLQ9H1B7 796 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CYP3A43Q9HB55 503 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 DMAP1Q9NPF5 467 aaPredicted RBP11.63□□□□□ -0.55
SPG11-216ENST00000559347 FAM49BQ9NUQ9 324 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 TDP1Q9NUW8 608 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
SPG11-216ENST00000559347 TRAV19A0A0A6YYK7 116 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 FAM170BA6NMN3 283 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 TNFRSF10BO14763 440 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 CILPO75339 1184 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 AP1G2O75843 785 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 CKMP06732 381 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 USP17L7P0C7H9 530 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 CD58P19256 250 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 MAGEA9P43362 315 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
SPG11-216ENST00000559347 SOX9P48436 509 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 SLC5A3P53794 718 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 TNK2Q07912 1038 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 IFRD2Q12894 506 aaPredicted RBP11.62□□□□□ -0.55
SPG11-216ENST00000559347 ZNF77Q15935 545 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 ZMIZ2Q8NF64 920 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 SLC2A14Q8TDB8 520 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 WHAMMQ8TF30 809 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 NELFBQ8WX92 580 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 ATOH1Q92858 354 aaPredicted RBP11.62□□□□□ -0.55
SPG11-216ENST00000559347 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 FAXDC2Q96IV6 333 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 CEP63Q96MT8 703 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 KCNK16Q96T55 309 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 NELL2Q99435 816 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 ARID3AQ99856 593 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 CSNK1G1Q9HCP0 422 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 GTSE1Q9NYZ3 720 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 GCNT4Q9P109 453 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 ARMCX3Q9UH62 379 aaPredicted RBP11.62□□□□□ -0.55
SPG11-216ENST00000559347 NDRG2Q9UN36 371 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms