RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 GOLGA7BQ2TAP0 167 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 DENND1BQ6P3S1 775 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 RBM23Q86U06 439 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 MSLNLQ96KJ4 702 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 MYRFLQ96LU7 910 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 KCNK16Q96T55 309 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 AGPAT1Q99943 283 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 TTLL2Q9BWV7 592 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC4A5Q9BY07 1137 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 DMAP1Q9NPF5 467 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 CYLDQ9NQC7 956 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 MAN1C1Q9NR34 630 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 KRT82Q9NSB4 513 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 DZANK1Q9NVP4 752 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 ZDHHC7Q9NXF8 308 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 ABI2Q9NYB9 513 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 CLEC1BQ9P126 229 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC27A5Q9Y2P5 690 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 USP3Q9Y6I4 520 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 NCANO14594 1321 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 ATP8B3O60423 1300 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 BDP1A6H8Y1 2624 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 C2orf16Q68DN1 1984 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 OBSL1O75147 1896 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 F8VP50 259 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 TRIM66O15016 1216 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 LINC01565O15544 149 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 AP1G2O75843 785 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 C8AP07357 584 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 PLEKP08567 350 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 HNRNPA1P09651 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 HMGA1P17096 107 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 ADORA2BP29275 332 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 EPHA5P54756 1037 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 CENPCQ03188 943 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 SYCE2Q6PIF2 218 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 CCDC149Q6ZUS6 474 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 TMEM110Q86TL2 294 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 SCML4Q8N228 414 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC7A14Q8TBB6 771 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 CASP10Q92851 521 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 TRMT2BQ96GJ1 504 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 HSFY1Q96LI6 401 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 CYP4F11Q9HBI6 524 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 COMMD8Q9NX08 183 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 DENND4CQ5VZ89 1909 aa15.66■□□□□ 0.1
SNRPA1-207ENST00000559309 DENND4AQ7Z401 1863 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 DDX3XO00571 662 aaKnown RBP eCLIP15.65■□□□□ 0.12e-19■■■□□ 18.1
SNRPA1-207ENST00000559309 TBX10O75333 385 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 CSPG5O95196 566 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 TPM1P09493 284 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 SKILP12757 684 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 GABRB2P47870 512 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 GPR15P49685 360 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 RPL10AP62906 217 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 KLHL30Q0D2K2 578 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 PTP4A2Q12974 167 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 PMF1Q6P1K2 205 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 CYP26C1Q6V0L0 522 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 TRIM72Q6ZMU5 477 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 PIGZQ86VD9 579 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 SECISBP2LQ93073 1101 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 PSMG2Q969U7 264 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 CHP1Q99653 195 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 S1PR5Q9H228 398 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 AVENQ9NQS1 362 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 ASB3Q9Y575 518 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 MYH10P35580 1976 aa15.65■□□□□ 0.1
SNRPA1-207ENST00000559309 M0QYV0 167 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 TNFRSF10AO00220 468 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 RFPL2O75678 378 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 SOAT2O75908 522 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 LCA5LO95447 670 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 GZMAP12544 262 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 CA8P35219 290 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 KIF11P52732 1056 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 GSCP56915 257 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 MAP3K7CLP57077 242 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 GSDMDP57764 484 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 ARID5AQ03989 594 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 DLX2Q07687 328 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 PDCLQ13371 301 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 PLD1Q13393 1074 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 DDR2Q16832 855 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 CLEC16AQ2KHT3 1053 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 PM20D1Q6GTS8 502 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 ANKRD54Q6NXT1 300 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 BHLHA9Q7RTU4 235 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 GPRIN1Q7Z2K8 1008 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 TMC8Q8IU68 726 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 SPC24Q8NBT2 197 aa15.64■□□□□ 0.09
SNRPA1-207ENST00000559309 UBA3Q8TBC4 463 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms