RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
USP3-211ENST00000559257 GALNT4Q8N4A0 578 aa8.81□□□□□ -1
USP3-211ENST00000559257 PSD4Q8NDX1 1056 aa8.81□□□□□ -1
USP3-211ENST00000559257 NEDD1Q8NHV4 660 aa8.81□□□□□ -1
USP3-211ENST00000559257 SCFD2Q8WU76 684 aa8.81□□□□□ -1
USP3-211ENST00000559257 ESR2Q92731 530 aa8.81□□□□□ -1
USP3-211ENST00000559257 DACT3Q96B18 629 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 PTCD3Q96EY7 689 aaKnown RBP8.81□□□□□ -1
USP3-211ENST00000559257 PAGE5Q96GU1 130 aa8.81□□□□□ -1
USP3-211ENST00000559257 SNX18Q96RF0 628 aa8.81□□□□□ -1
USP3-211ENST00000559257 TBCBQ99426 244 aa8.81□□□□□ -1
USP3-211ENST00000559257 SLC29A1Q99808 456 aa8.81□□□□□ -1
USP3-211ENST00000559257 MYD88Q99836 296 aa8.81□□□□□ -1
USP3-211ENST00000559257 TARS2Q9BW92 718 aaKnown RBP8.81□□□□□ -1
USP3-211ENST00000559257 ZMYND12Q9H0C1 365 aa8.81□□□□□ -1
USP3-211ENST00000559257 EPB41L4BQ9H329 900 aa8.81□□□□□ -1
USP3-211ENST00000559257 HIPK3Q9H422 1215 aa8.81□□□□□ -1
USP3-211ENST00000559257 SLITRK6Q9H5Y7 841 aa8.81□□□□□ -1
USP3-211ENST00000559257 GDAP2Q9NXN4 497 aa8.81□□□□□ -1
USP3-211ENST00000559257 SUCOQ9UBS9 1254 aaKnown RBP8.81□□□□□ -1
USP3-211ENST00000559257 ZFP69BQ9UJL9 534 aa8.81□□□□□ -1
USP3-211ENST00000559257 KCNH3Q9ULD8 1083 aa8.81□□□□□ -1
USP3-211ENST00000559257 PRR12Q9ULL5 1215 aa8.81□□□□□ -1
USP3-211ENST00000559257 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
USP3-211ENST00000559257 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.81□□□□□ -1
USP3-211ENST00000559257 CPQQ9Y646 472 aa8.81□□□□□ -1
USP3-211ENST00000559257 ZNF804BA4D1E1 1349 aa8.81□□□□□ -1
USP3-211ENST00000559257 EMSYQ7Z589 1322 aa8.81□□□□□ -1
USP3-211ENST00000559257 PCDH11YQ9BZA8 1340 aa8.81□□□□□ -1
USP3-211ENST00000559257 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 TNPO2O14787 897 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A9O60656 530 aa8.8□□□□□ -1
USP3-211ENST00000559257 CIB2O75838 187 aa8.8□□□□□ -1
USP3-211ENST00000559257 MOCS3O95396 460 aa8.8□□□□□ -1
USP3-211ENST00000559257 CTDNEP1O95476 244 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A6P19224 532 aa8.8□□□□□ -1
USP3-211ENST00000559257 ITIH1P19827 911 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A1P22309 533 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A4P22310 534 aa8.8□□□□□ -1
USP3-211ENST00000559257 CDC25AP30304 524 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A3P35503 534 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A5P35504 534 aa8.8□□□□□ -1
USP3-211ENST00000559257 CCT4P50991 539 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 RPP38P78345 283 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 STRN3Q13033 797 aa8.8□□□□□ -1
USP3-211ENST00000559257 SNX17Q15036 470 aa8.8□□□□□ -1
USP3-211ENST00000559257 NFIL3Q16649 462 aa8.8□□□□□ -1
USP3-211ENST00000559257 PXDC1Q5TGL8 231 aa8.8□□□□□ -1
USP3-211ENST00000559257 KIAA1614Q5VZ46 1190 aa8.8□□□□□ -1
USP3-211ENST00000559257 GPR180Q86V85 440 aa8.8□□□□□ -1
USP3-211ENST00000559257 PM20D2Q8IYS1 436 aa8.8□□□□□ -1
USP3-211ENST00000559257 RTKN2Q8IZC4 609 aa8.8□□□□□ -1
USP3-211ENST00000559257 ICA1LQ8NDH6 482 aa8.8□□□□□ -1
USP3-211ENST00000559257 ACTRT1Q8TDG2 376 aa8.8□□□□□ -1
USP3-211ENST00000559257 CHAC2Q8WUX2 184 aa8.8□□□□□ -1
USP3-211ENST00000559257 THAP11Q96EK4 314 aa8.8□□□□□ -1
USP3-211ENST00000559257 MS4A14Q96JA4 679 aa8.8□□□□□ -1
USP3-211ENST00000559257 CDK5RAP1Q96SZ6 601 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 C17orf62Q9BQA9 187 aa8.8□□□□□ -1
USP3-211ENST00000559257 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
USP3-211ENST00000559257 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A7Q9HAW7 530 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A10Q9HAW8 530 aa8.8□□□□□ -1
USP3-211ENST00000559257 UGT1A8Q9HAW9 530 aa8.8□□□□□ -1
USP3-211ENST00000559257 ASNSD1Q9NWL6 643 aa8.8□□□□□ -1
USP3-211ENST00000559257 LRWD1Q9UFC0 647 aa8.8□□□□□ -1
USP3-211ENST00000559257 ZNF175Q9Y473 711 aa8.8□□□□□ -1
USP3-211ENST00000559257 MYO5BQ9ULV0 1848 aa8.8□□□□□ -1
USP3-211ENST00000559257 MST1RQ04912 1400 aa8.8□□□□□ -1
USP3-211ENST00000559257 H0Y858 1186 aa8.8□□□□□ -1
USP3-211ENST00000559257 H3BRJ5 948 aa8.8□□□□□ -1
USP3-211ENST00000559257 C2CD2LO14523 706 aa8.8□□□□□ -1
USP3-211ENST00000559257 KRT3P12035 628 aa8.8□□□□□ -1
USP3-211ENST00000559257 SHMT1P34896 483 aa8.8□□□□□ -1
USP3-211ENST00000559257 GRIK1P39086 918 aa8.8□□□□□ -1
USP3-211ENST00000559257 ARL1P40616 181 aaPredicted RBP8.8□□□□□ -1
USP3-211ENST00000559257 HARS2P49590 506 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 GSTO1P78417 241 aa8.8□□□□□ -1
USP3-211ENST00000559257 GHRHRQ02643 423 aa8.8□□□□□ -1
USP3-211ENST00000559257 KRT17Q04695 432 aa8.8□□□□□ -1
USP3-211ENST00000559257 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -1
USP3-211ENST00000559257 SNTA1Q13424 505 aa8.8□□□□□ -1
USP3-211ENST00000559257 SNAPC2Q13487 334 aa8.8□□□□□ -1
USP3-211ENST00000559257 SIM2Q14190 667 aaPredicted RBP8.8□□□□□ -1
USP3-211ENST00000559257 ZNF124Q15973 351 aa8.8□□□□□ -1
USP3-211ENST00000559257 KYNUQ16719 465 aa8.8□□□□□ -1
USP3-211ENST00000559257 AARS2Q5JTZ9 985 aaKnown RBP8.8□□□□□ -1
USP3-211ENST00000559257 PGM2L1Q6PCE3 622 aa8.8□□□□□ -1
USP3-211ENST00000559257 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
USP3-211ENST00000559257 TRIM59Q8IWR1 403 aa8.8□□□□□ -1
USP3-211ENST00000559257 ATAD1Q8NBU5 361 aa8.8□□□□□ -1
USP3-211ENST00000559257 CATSPER1Q8NEC5 780 aa8.8□□□□□ -1
USP3-211ENST00000559257 SLC9A6Q92581 669 aa8.8□□□□□ -1
USP3-211ENST00000559257 NELL1Q92832 810 aa8.8□□□□□ -1
USP3-211ENST00000559257 FMO2Q99518 471 aa8.8□□□□□ -1
USP3-211ENST00000559257 HEMGNQ9BXL5 484 aa8.8□□□□□ -1
USP3-211ENST00000559257 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.8□□□□□ -1
USP3-211ENST00000559257 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
USP3-211ENST00000559257 OR51B5Q9H339 312 aa8.8□□□□□ -1
USP3-211ENST00000559257 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms