RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SCAMP5Q8TAC9 235 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 RIN3Q8TB24 985 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 RSPRY1Q96DX4 576 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 TRMT2BQ96GJ1 504 aaKnown RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 ERGIC2Q96RQ1 377 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 UHRF1Q96T88 793 aaPredicted RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 RPP25Q9BUL9 199 aaKnown RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 ASAH2Q9NR71 780 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 DNAJC12Q9UKB3 198 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 ASB3Q9Y575 518 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 TRIOO75962 3097 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 FAM92AA1XBS5 289 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 ANHXE9PGG2 379 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 FOXN3O00409 490 aaPredicted RBP12.12□□□□□ -0.47
SNX1-204ENST00000559061 AP5Z1O43299 807 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 MICAL2O94851 1124 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 ASGR2P07307 311 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 PAEPP09466 180 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 LAMP2P13473 410 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 UCHL3P15374 230 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 CLCN1P35523 988 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 GRIK1P39086 918 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 PBX1P40424 430 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 SLC5A3P53794 718 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 HTR4Q13639 388 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 BHLHA9Q7RTU4 235 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 ZDHHC14Q8IZN3 488 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 TDRD5Q8NAT2 981 aaKnown RBP12.12□□□□□ -0.47
SNX1-204ENST00000559061 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 JAKMIP2Q96AA8 810 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 ZNF512Q96ME7 567 aaPredicted RBP12.12□□□□□ -0.47
SNX1-204ENST00000559061 HEXIM2Q96MH2 286 aaKnown RBP12.12□□□□□ -0.47
SNX1-204ENST00000559061 SLC22A12Q96S37 553 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 MED10Q9BTT4 135 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
SNX1-204ENST00000559061 CYTH4Q9UIA0 394 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
SNX1-204ENST00000559061 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX1-204ENST00000559061 F8VZ95 297 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 TRIM66O15016 1216 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 PRAMEF12O95522 483 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 VDRP11473 427 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 NPR3P17342 541 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 GABRR2P28476 465 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 NR1I3Q14994 352 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 PARM1Q6UWI2 310 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 PDZD4Q76G19 769 aaPredicted RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 ENOSF1Q7L5Y1 443 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 GJD3Q8N144 294 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 FGF14Q92915 247 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 LRRC3BQ96PB8 259 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 PLA2G2FQ9BZM2 168 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 TTYH3Q9C0H2 523 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 FAM207AQ9NSI2 230 aaPredicted RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 FAM50BQ9Y247 325 aa12.11□□□□□ -0.47
SNX1-204ENST00000559061 MRPS23Q9Y3D9 190 aaKnown RBP12.11□□□□□ -0.47
SNX1-204ENST00000559061 NCOR1O75376 2440 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 C2orf78A6NCI8 922 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
SNX1-204ENST00000559061 CYP26A1O43174 497 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 CAVIN2O95810 425 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 ZDHHC11BP0C7U3 371 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 CSH1P0DML2 217 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 CSH2P0DML3 217 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 GBP2P32456 591 aaPredicted RBP12.1□□□□□ -0.47
SNX1-204ENST00000559061 MFAP3P55082 362 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 YWHAEP62258 255 aaKnown RBP12.1□□□□□ -0.47
SNX1-204ENST00000559061 ZXDBP98169 803 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 FANCCQ00597 558 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 UBXN1Q04323 297 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 PDE4CQ08493 712 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 RAB41Q5JT25 222 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 FAM78AQ5JUQ0 283 aa12.1□□□□□ -0.47
SNX1-204ENST00000559061 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
SNX1-204ENST00000559061 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms