RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SPEM1Q8N4L4 309 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 GLIS3Q8NEA6 775 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 CXorf38Q8TB03 319 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 NELL1Q92832 810 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 TRMT2BQ96GJ1 504 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 HPDLQ96IR7 371 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 FNBP1Q96RU3 617 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SYT15Q9BQS2 421 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 EPC1Q9H2F5 836 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 LMAN1LQ9HAT1 526 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 AGPAT3Q9NRZ7 376 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 TMLHEQ9NVH6 421 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 CGNQ9P2M7 1197 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 GMEB2Q9UKD1 530 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 RAB23Q9ULC3 237 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 MAGED2Q9UNF1 606 aaPredicted RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF292O60281 2723 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ANAPC1Q9H1A4 1944 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 EP300Q09472 2414 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 KIAA1549LQ6ZVL6 1849 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 GABRDO14764 452 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 POLR2DO15514 142 aaKnown RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 LILRB5O75023 590 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 TADA3O75528 432 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 NOL4O94818 638 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 F11P03951 625 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 DLATP10515 647 aaKnown RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CHRNB1P11230 501 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 TDGF1P13385 188 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 HMGA1P17096 107 aaKnown RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 ANXA13P27216 316 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CXCL12P48061 93 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 SOX9P48436 509 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 GPR15P49685 360 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 PDE6CP51160 858 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CYP2J2P51589 502 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF268Q14587 947 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 PSMD6Q15008 389 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 BMT2Q1RMZ1 405 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 SOWAHAQ2M3V2 549 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 FOXD4L6Q3SYB3 417 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 DGKKQ5KSL6 1271 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CC2D1AQ6P1N0 951 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 TSSK4Q6SA08 328 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 FOXD4L3Q6VB84 417 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 EPM2AIP1Q7L775 607 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 ERMP1Q7Z2K6 904 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 SCN4BQ8IWT1 228 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CEP57L1Q8IYX8 460 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 MAB21L3Q8N8X9 362 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 FSIP1Q8NA03 581 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 XXYLT1Q8NBI6 393 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 SUMF1Q8NBK3 374 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 STKLD1Q8NE28 680 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 OR5B17Q8NGF7 314 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 GOLGA5Q8TBA6 731 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 HPS3Q969F9 1004 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 ZFYVE19Q96K21 471 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 FAM84AQ96KN4 292 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 PKMYT1Q99640 499 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CGRRF1Q99675 332 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 C7orf25Q9BPX7 421 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 SMG9Q9H0W8 520 aaKnown RBP8.62□□□□□ -1.03
TRAF3-205ENST00000558700 EXOC1Q9NV70 894 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 GTSE1Q9NYZ3 720 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CFAP45Q9UL16 551 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 CDH9Q9ULB4 789 aa8.62□□□□□ -1.03
TRAF3-205ENST00000558700 TRAV19A0A0A6YYK7 116 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PVALEFA0A1B0GWK0 134 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 ANKRD33BA6NCL7 494 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TGFB1I1O43294 461 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CLSTN1O94985 981 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PAPSS2O95340 614 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CKMP06732 381 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 USP17L7P0C7H9 530 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF16P17020 682 aaPredicted RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TNNI1P19237 187 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 WARSP23381 471 aaKnown RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CYP2F1P24903 491 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 HOXD13P35453 343 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PSMC1P62191 440 aaKnown RBP8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TNNC1P63316 161 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 AMPD2Q01433 879 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 SATB1Q01826 763 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TNK2Q07912 1038 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CYP24A1Q07973 514 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 EHHADHQ08426 723 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 KCNB1Q14721 858 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PON2Q15165 354 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 PDGFRLQ15198 375 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 DDR2Q16832 855 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 CCDC142Q17RM4 750 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 SDHAF4Q5VUM1 108 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 RESP18Q5W5W9 173 aa8.61□□□□□ -1.03
TRAF3-205ENST00000558700 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms