RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SMC2O95347 1197 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 USP17L7P0C7H9 530 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PFKLP17858 780 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 GTF2H1P32780 548 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 CTHP32929 405 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PIK3CAP42336 1068 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PRCPP42785 496 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 RAP1GAPP47736 663 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 ID4P47928 161 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PPP3CCP48454 512 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 CACNA2D1P54289 1103 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 USP46P62068 366 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 TNK2Q07912 1038 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PPP3CAQ08209 521 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 ITPRIPL2Q3MIP1 535 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF658Q5TYW1 1059 aaPredicted RBP16.49■□□□□ 0.23
CSHL1-208ENST00000558609 SCARA5Q6ZMJ2 495 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
CSHL1-208ENST00000558609 CYP2S1Q96SQ9 504 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
CSHL1-208ENST00000558609 CHRDQ9H2X0 955 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 LMAN1LQ9HAT1 526 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 TMEM30AQ9NV96 361 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 ANAPC1Q9H1A4 1944 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 KIF26AQ9ULI4 1882 aaPredicted RBP16.48■□□□□ 0.23
CSHL1-208ENST00000558609 CLSTN1O94985 981 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 TRIM49P0CI25 452 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 TRIM49CP0CI26 452 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 CHRNB1P11230 501 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 ASPAP45381 313 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 SOX9P48436 509 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 GCLMP48507 274 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 PDE6CP51160 858 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 MTAPQ13126 283 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 TTC8Q8TAM2 541 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 SLC22A12Q96S37 553 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 TRPM5Q9NZQ8 1165 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 DNAH14Q0VDD8 3507 aa16.48■□□□□ 0.23
CSHL1-208ENST00000558609 ATP8B3O60423 1300 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 C2orf78A6NCI8 922 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF840PA6NDX5 716 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CETN3O15182 167 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CKMP06732 381 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 TCF3P15923 654 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 HDCP19113 662 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 NDST1P52848 882 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CSTF1Q05048 431 aaKnown RBP16.47■□□□□ 0.23
CSHL1-208ENST00000558609 RUNX3Q13761 415 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
CSHL1-208ENST00000558609 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
CSHL1-208ENST00000558609 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 ACOT1Q86TX2 421 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 NUP93Q8N1F7 819 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
CSHL1-208ENST00000558609 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 IMPG2Q9BZV3 1241 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CYP3A43Q9HB55 503 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 HPS4Q9NQG7 708 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 PRMT8Q9NR22 394 aaPredicted RBP16.47■□□□□ 0.23
CSHL1-208ENST00000558609 R4GN57 208 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 CACNA1AO00555 2505 aa16.47■□□□□ 0.23
CSHL1-208ENST00000558609 FANCMQ8IYD8 2048 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 LRRC32Q14392 662 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 MTF1Q14872 753 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 PDGFRLQ15198 375 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF77Q15935 545 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 DGKKQ5KSL6 1271 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
CSHL1-208ENST00000558609 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 NELL1Q92832 810 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
CSHL1-208ENST00000558609 SMARCD1Q96GM5 515 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 SLITRK1Q96PX8 696 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 KCNK16Q96T55 309 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 MED10Q9BTT4 135 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 APOBEC3GQ9HC16 384 aaKnown RBP16.46■□□□□ 0.23
CSHL1-208ENST00000558609 IL37Q9NZH6 218 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 CIZ1Q9ULV3 898 aaPredicted RBP16.46■□□□□ 0.23
CSHL1-208ENST00000558609 ARHGAP26Q9UNA1 814 aa16.46■□□□□ 0.23
CSHL1-208ENST00000558609 OTOL1A6NHN0 477 aaPredicted RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 STX10O60499 249 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 RTN3O95197 1032 aaPredicted RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 EPB41P11171 864 aaKnown RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 YWHAQP27348 245 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 FKBP3Q00688 224 aaKnown RBP16.45■□□□□ 0.22
CSHL1-208ENST00000558609 TAF10Q12962 218 aa16.45■□□□□ 0.22
CSHL1-208ENST00000558609 USP4Q13107 963 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms