RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 MESP2Q0VG99 397 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 STRN3Q13033 797 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 MAPK7Q13164 816 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TUSC1Q2TAM9 212 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 ZC2HC1CQ53FD0 456 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SDHAF4Q5VUM1 108 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SPATA1Q5VX52 437 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 C9orf57Q5W0N0 161 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 LARP1BQ659C4 914 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 HAUS3Q68CZ6 603 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 ZPBP2Q6X784 338 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SLC36A4Q6YBV0 504 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 PACS2Q86VP3 889 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 METTL23Q86XA0 190 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SLC41A1Q8IVJ1 513 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SFTPA1Q8IWL2 248 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 DIS3L2Q8IYB7 885 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 DCP1BQ8IZD4 617 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 THEM5Q8N1Q8 247 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 STKLD1Q8NE28 680 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 LRRC15Q8TF66 581 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SPIRE2Q8WWL2 714 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 WASF1Q92558 559 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TRMT2BQ96GJ1 504 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 MYRFLQ96LU7 910 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 DRC1Q96MC2 740 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TSPAN18Q96SJ8 248 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 NTPCRQ9BSD7 190 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 HAPLN2Q9GZV7 340 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 C17orf75Q9HAS0 396 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TMLHEQ9NVH6 421 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 GCNT4Q9P109 453 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 ORC3Q9UBD5 711 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 UXTQ9UBK9 157 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 PCOLCE2Q9UKZ9 415 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 URB1O60287 2271 aaKnown RBP7.27□□□□□ -1.24
LRRC28-207ENST00000558500 GON4LQ3T8J9 2241 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 A0A0A0MRY4 1105 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 IGHV1OR15-9A0A0B4J2B8 117 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ANO9A1A5B4 782 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 TRABD2BA6NFA1 517 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 MYMKA6NI61 221 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 CYB561D2O14569 222 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 PRPF40AO75400 957 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 DKK1O94907 266 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 KAT7O95251 611 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 CYP17A1P05093 508 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ADRB2P07550 413 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 OR52Z1P0C646 297 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 MAPTP10636 758 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 FDPSP14324 419 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 GABRG2P18507 467 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 EIF2DP41214 584 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 GRIA2P42262 883 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 MATR3P43243 847 aaKnown RBP eCLIP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 SLC6A11P48066 632 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 KCNB1Q14721 858 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 SAFBQ15424 915 aaKnown RBP eCLIP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 KYAT1Q16773 422 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 DDR2Q16832 855 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 WSCD1Q658N2 575 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 LAPTM4BQ86VI4 370 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ZNF843Q8N446 348 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ARL14EPQ8N8R7 260 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 TRIML1Q8N9V2 468 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 LSM14AQ8ND56 463 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 TMEM161BQ8NDZ6 487 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 SPATA18Q8TC71 538 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 YTHDC1Q96MU7 727 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 PNKPQ96T60 521 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 PI4K2AQ9BTU6 479 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 FAM124BQ9H5Z6 455 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ZDHHC4Q9NPG8 344 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
LRRC28-207ENST00000558500 SUSD2Q9UGT4 822 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 ARHGAP26Q9UNA1 814 aa7.27□□□□□ -1.25
LRRC28-207ENST00000558500 C2orf78A6NCI8 922 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 E9PMD0 336 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 J3QKU1 62 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 LEFTY2O00292 366 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 FAM189A1O60320 539 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 PFKFB2O60825 505 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 APODP05090 189 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 PDIA4P13667 645 aaKnown RBP7.26□□□□□ -1.25
LRRC28-207ENST00000558500 HDCP19113 662 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 TNFRSF4P43489 277 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 SMTNP53814 917 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 RPL10AP62906 217 aaKnown RBP7.26□□□□□ -1.25
LRRC28-207ENST00000558500 ZXDBP98169 803 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 GRIK2Q13002 908 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 DHCR24Q15392 516 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 NFE2Q16621 373 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-207ENST00000558500 PLEKHG6Q3KR16 790 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 TMEM259Q4ZIN3 620 aa7.26□□□□□ -1.25
LRRC28-207ENST00000558500 JADE1Q6IE81 842 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms