RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 NUP62CLQ9H1M0 184 aa9.2□□□□□ -0.94
USP3-208ENST00000558285 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
USP3-208ENST00000558285 MYBPHLA2RUH7 354 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 SLC9A3R1O14745 358 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 MBD3O95983 291 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 CKMP06732 381 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 FAM200BP0CF97 657 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ATF6P18850 670 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 AOC1P19801 751 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 BDNFP23560 247 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 GDI1P31150 447 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 KPNA1P52294 538 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 MORC3Q14149 939 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 LRRC32Q14392 662 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ZNF268Q14587 947 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 PDGFRLQ15198 375 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 SLC44A4Q53GD3 710 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ANKRD40Q6AI12 368 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 MON1AQ86VX9 555 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TMC8Q8IU68 726 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ARID3BQ8IVW6 561 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 CMTM8Q8IZV2 173 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 NUP93Q8N1F7 819 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 BPIFB1Q8TDL5 484 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 GPR152Q8TDT2 470 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ZNF516Q92618 1163 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 CDK5RAP1Q96SZ6 601 aaKnown RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 LPIN3Q9BQK8 851 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TBC1D17Q9HA65 648 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 C11orf16Q9NQ32 467 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 KIAA1257Q9ULG3 409 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 CA14Q9ULX7 337 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 SIT1Q9Y3P8 196 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TCHHQ07283 1943 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ANK1P16157 1881 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 KANSL1LA0AUZ9 987 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 HEPACAM2A8MVW5 462 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 LMO2P25791 158 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 YWHAQP27348 245 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 GPC5P78333 572 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 DLG4P78352 724 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 INCA1Q0VD86 236 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 STILQ15468 1287 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 DDR2Q16832 855 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 PREPLQ4J6C6 727 aaPredicted RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 ZC3H14Q6PJT7 736 aaKnown RBP9.19□□□□□ -0.94
USP3-208ENST00000558285 OSTM1Q86WC4 334 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 CRYBG2Q8N1P7 616 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 ANKRD20A12PQ8NF67 263 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TCEAL4Q96EI5 215 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 NT5C1BQ96P26 610 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 PKMYT1Q99640 499 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 SMYD3Q9H7B4 428 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 PNPLA8Q9NP80 782 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 TDP1Q9NUW8 608 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 RWDD2AQ9UIY3 292 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
USP3-208ENST00000558285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.19□□□□□ -0.94
USP3-208ENST00000558285 NCANO14594 1321 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 BIN1O00499 593 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 PMM2O15305 246 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 AP1G2O75843 785 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 SOAT2O75908 522 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 VNN2O95498 520 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 NDST1P52848 882 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 STARD6P59095 220 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
USP3-208ENST00000558285 TANGO2Q6ICL3 276 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 ENOSF1Q7L5Y1 443 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 RALGPS2Q86X27 583 aaPredicted RBP9.18□□□□□ -0.94
USP3-208ENST00000558285 ZC3H3Q8IXZ2 948 aaKnown RBP9.18□□□□□ -0.94
USP3-208ENST00000558285 CPA6Q8N4T0 437 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 TAS1R2Q8TE23 839 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 HEXIM2Q96MH2 286 aaKnown RBP9.18□□□□□ -0.94
USP3-208ENST00000558285 LRRC3Q9BY71 257 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 CRISPLD1Q9H336 500 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 CLSTN2Q9H4D0 955 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 YY1AP1Q9H869 796 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 CRTAC1Q9NQ79 661 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 KRT82Q9NSB4 513 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 C2orf16Q68DN1 1984 aa9.18□□□□□ -0.94
USP3-208ENST00000558285 F8VP50 259 aa9.17□□□□□ -0.94
USP3-208ENST00000558285 NARSO43776 548 aaKnown RBP9.17□□□□□ -0.94
USP3-208ENST00000558285 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
USP3-208ENST00000558285 VNN1O95497 513 aa9.17□□□□□ -0.94
USP3-208ENST00000558285 ABL1P00519 1130 aa9.17□□□□□ -0.94
USP3-208ENST00000558285 AFPP02771 609 aaKnown RBP9.17□□□□□ -0.94
USP3-208ENST00000558285 HDCP19113 662 aa9.17□□□□□ -0.94
USP3-208ENST00000558285 SCN1AP35498 2009 aa9.17□□□□□ -0.94
USP3-208ENST00000558285 CCR2P41597 374 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms