RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ALS2CR12Q96Q35 445 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 LRRC4Q9HBW1 653 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 PNPLA8Q9NP80 782 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 PARVAQ9NVD7 372 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 FNIP2Q9P278 1114 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 DUSP10Q9Y6W6 482 aa17.79■□□□□ 0.44
SNX1-203ENST00000558040 MTMR11A4FU01 709 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 E5RJQ4 531 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 KIF2AO00139 706 aaPredicted RBP17.78■□□□□ 0.44
SNX1-203ENST00000558040 TRIM66O15016 1216 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 ATMINO43313 823 aaPredicted RBP17.78■□□□□ 0.44
SNX1-203ENST00000558040 TUBB4AP04350 444 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 ERBB2P04626 1255 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 CA8P35219 290 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 RPL34P49207 117 aaKnown RBP17.78■□□□□ 0.44
SNX1-203ENST00000558040 NDUFV1P49821 464 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 ERVK-21P61565 698 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 ROR1Q01973 937 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 TAP1Q03518 808 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 CYP4A22Q5TCH4 519 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 TPGS2Q68CL5 300 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 DNAJC24Q6P3W2 148 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 RSPO2Q6UXX9 243 aaPredicted RBP17.78■□□□□ 0.44
SNX1-203ENST00000558040 TMC7Q7Z402 723 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 C3orf20Q8ND61 904 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 PGLYRP2Q96PD5 576 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 SMOQ99835 787 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 CLSTN3Q9BQT9 956 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 NUP85Q9BW27 656 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
SNX1-203ENST00000558040 YBX2Q9Y2T7 364 aaKnown RBP17.78■□□□□ 0.44
SNX1-203ENST00000558040 TULP2O00295 520 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 LPXNO60711 386 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 BEST1O76090 585 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 MTA2O94776 668 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 RPL17P18621 184 aaKnown RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 CYP2F1P24903 491 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 GRIK1P39086 918 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 HADHBP55084 474 aaKnown RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 C2CD6Q53TS8 623 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 PLEKHA7Q6IQ23 1121 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 RNF19BQ6ZMZ0 732 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 XYLT1Q86Y38 959 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 SIX6OS1Q8N1H7 587 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 TRIM58Q8NG06 486 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 C16orf45Q96MC5 204 aaPredicted RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 SELENOOQ9BVL4 669 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 EMILIN2Q9BXX0 1053 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 PBX4Q9BYU1 374 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 RHOBTB2Q9BYZ6 727 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 RXFP1Q9HBX9 757 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 ALG13Q9NP73 1137 aaKnown RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 TLR9Q9NR96 1032 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 AFF4Q9UHB7 1163 aaKnown RBP17.77■□□□□ 0.44
SNX1-203ENST00000558040 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 MAFFQ9ULX9 164 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 PAXBP1Q9Y5B6 917 aa17.77■□□□□ 0.44
SNX1-203ENST00000558040 GBF1Q92538 1859 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.76■□□□□ 0.43
SNX1-203ENST00000558040 WDR27A2RRH5 827 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 BUB1O43683 1085 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 LILRB3O75022 631 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 FBXO21O94952 628 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ARHGEF15O94989 841 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 CXCL14O95715 111 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ABL1P00519 1130 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 LCP1P13796 627 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 CDR1P51861 262 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 RPL10AP62906 217 aaKnown RBP17.76■□□□□ 0.43
SNX1-203ENST00000558040 MAMLD1Q13495 774 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 RAB33AQ14088 237 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 PPP2R2DQ66LE6 453 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 OR6B2Q6IFH4 312 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 NYAP1Q6ZVC0 841 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 SCN4BQ8IWT1 228 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ATAD1Q8NBU5 361 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ZMIZ2Q8NF64 920 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ZNF461Q8TAF7 563 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 ZNF564Q8TBZ8 553 aaPredicted RBP17.76■□□□□ 0.43
SNX1-203ENST00000558040 SPPL3Q8TCT6 385 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 C8orf48Q96LL4 319 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 NKX2-4Q9H2Z4 354 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 NGRNQ9NPE2 291 aaKnown RBP17.76■□□□□ 0.43
SNX1-203ENST00000558040 HSFX1Q9UBD0 423 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 IRAK3Q9Y616 596 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 PTPRDP23468 1912 aa17.76■□□□□ 0.43
SNX1-203ENST00000558040 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 F8VP50 259 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 GOLGA8SH3BPF8 625 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 ADAM12O43184 909 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 SART1O43290 800 aaKnown RBP17.75■□□□□ 0.43
SNX1-203ENST00000558040 ABLIM3O94929 683 aa17.75■□□□□ 0.43
SNX1-203ENST00000558040 MOCS3O95396 460 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms