RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 LRRTM3Q86VH5 581 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 MYLPFQ96A32 169 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 ACBD6Q9BR61 282 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 PLEKHA4Q9H4M7 779 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 FAM200BP0CF97 657 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 MAN1A1P33908 653 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 PLA2G4AP47712 749 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 PLCB3Q01970 1234 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 YWHAHQ04917 246 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 TXNRD3NBQ6F5E7 133 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM173Q86WV6 379 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 ARFGAP1Q8N6T3 406 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 GPR161Q8N6U8 529 aaKnown RBP21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 ANKRD7Q92527 254 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 NDRG1Q92597 394 aaKnown RBP21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 ACSF2Q96CM8 615 aaPredicted RBP21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 PNKPQ96T60 521 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 PCDHB8Q9UN66 801 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 TSC2P49815 1807 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM189-UBE2V1I3L0A0 370 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 KRIT1O00522 736 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 XPO1O14980 1071 aaKnown RBP21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 AP1G2O75843 785 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 TIMP1P01033 207 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 OR4Q2P0C623 313 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 PIGHQ14442 188 aaPredicted RBP21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 INTS6LQ5JSJ4 861 aaKnown RBP21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 SH3PXD2AQ5TCZ1 1133 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 FAM117BQ6P1L5 589 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 RHOT1Q8IXI2 618 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 LRRC1Q9BTT6 524 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 PARD6BQ9BYG5 372 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM59LQ9UK28 342 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 ADAM28Q9UKQ2 775 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 HOXA2O43364 376 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 ACRP10323 421 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 RAG1P15918 1043 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 EN2P19622 333 aaPredicted RBP21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 SLC8A3P57103 927 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 SLC6A3Q01959 620 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 ITIH3Q06033 890 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 ADIGQ0VDE8 80 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 RAB6CQ53S08 254 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 CEP57Q86XR8 500 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 KLHL7Q8IXQ5 586 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 HDAC7Q8WUI4 952 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.037e-7■■■□□ 16
SNRPA1-205ENST00000558036 KRT12Q99456 494 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 SMOQ99835 787 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 GPR62Q9BZJ7 368 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 RAB6CQ9H0N0 254 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 MARCH5Q9NX47 278 aa21.46■■□□□ 1.03
SNRPA1-205ENST00000558036 TCRBV7S2A1N4TA0A589 114 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 ALDH2P05091 517 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 NDUFV1P49821 464 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 THEM5Q8N1Q8 247 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 MMGT1Q8N4V1 131 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 NIPA2Q8N8Q9 360 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 RXFP2Q8WXD0 754 aa21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 TTC7AQ9ULT0 858 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-205ENST00000558036 C2CD4BA6NLJ0 364 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 LRCH4O75427 683 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 ZMYND10O75800 440 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 PDGFRAP16234 1089 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 TYMPP19971 482 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 BDNFP23560 247 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 PAX3P23760 479 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 RPL34P49207 117 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 C15orf59Q2T9L4 293 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 SEL1L2Q5TEA6 688 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 FAM171A1Q5VUB5 890 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 FAM171BQ6P995 826 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 ZMIZ2Q8NF64 920 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 FNIP1Q8TF40 1166 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 CFAP57Q96MR6 1250 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 PKMYT1Q99640 499 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 MCOLN1Q9GZU1 580 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 FAN1Q9Y2M0 1017 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 PSTPIP1O43586 416 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 DEFB103AP81534 67 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 RBM10P98175 930 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 SLC7A5Q01650 507 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 CDO1Q16878 200 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 FBXO38Q6PIJ6 1188 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 GPRIN1Q7Z2K8 1008 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 ZDHHC14Q8IZN3 488 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 HSFY1Q96LI6 401 aa21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 MRPL9Q9BYD2 267 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-205ENST00000558036 PI4K2BG5E9Z4 385 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 TRAPPC3O43617 180 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 GALTP07902 379 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 GPD1P21695 349 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ZNF143P52747 638 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ATP11AP98196 1134 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 SMTNL2Q2TAL5 461 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ZFYVE27Q5T4F4 411 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ANKS1BQ7Z6G8 1248 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 LRRC43Q8N309 656 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 SPATA18Q8TC71 538 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms