RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-211ENST00000557623 MRPS31Q92665 395 aaKnown RBP13.27□□□□□ -0.29
SLIRP-211ENST00000557623 TATDN2Q93075 761 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 ZNF518BQ9C0D4 1074 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 TRPV4Q9HBA0 871 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.29
SLIRP-211ENST00000557623 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 FAM86C2PA6NEL3 165 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 F8VP50 259 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 CLDN5O00501 218 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 TECTAO75443 2155 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 F11P03951 625 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 WEE1P30291 646 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 PPP3CCP48454 512 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 CUL2Q13617 745 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 CYFIP2Q96F07 1278 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 ASIC4Q96FT7 647 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 ZSWIM3Q96MP5 696 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 MED15Q96RN5 788 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 KXD1Q9BQD3 176 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 LRFN3Q9BTN0 628 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-211ENST00000557623 C11orf16Q9NQ32 467 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 WNT16Q9UBV4 365 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
SLIRP-211ENST00000557623 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 NARSO43776 548 aaKnown RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 AP1G2O75843 785 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 RTN3O95197 1032 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 PTMSP20962 102 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 FCARP24071 287 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 CYP4F8P98187 520 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 PFKPQ01813 784 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 ORC1Q13415 861 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 PAQR9Q6ZVX9 377 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 FUKQ8N0W3 1084 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 DEPDC1BQ8WUY9 529 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 PBXIP1Q96AQ6 731 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 RPP25Q9BUL9 199 aaKnown RBP13.25□□□□□ -0.29
SLIRP-211ENST00000557623 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 KRT82Q9NSB4 513 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 OBP2AQ9NY56 170 aa13.25□□□□□ -0.29
SLIRP-211ENST00000557623 TICRRQ7Z2Z1 1910 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 CFHP08603 1231 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 FAM200BP0CF97 657 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 CCDC130P13994 396 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 PFKLP17858 780 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 PSMC3P17980 439 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 PDE6CP51160 858 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 RAD23BP54727 409 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 LRMPQ12912 555 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 STX1AQ16623 288 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 MAN2A1Q16706 1144 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 ZNF394Q53GI3 561 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 IRF2BP1Q8IU81 584 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 ST13P5Q8NFI4 369 aaPredicted RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 ENOX1Q8TC92 643 aaKnown RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 SLITRK1Q96PX8 696 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 ARID3AQ99856 593 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 TRMT61BQ9BVS5 477 aaKnown RBP13.24□□□□□ -0.29
SLIRP-211ENST00000557623 CSNK1G1Q9HCP0 422 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
SLIRP-211ENST00000557623 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms