RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 MFSD1Q9H3U5 465 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 ZFP14Q9HCL3 533 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 TMLHEQ9NVH6 421 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 ANK1P16157 1881 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 SLC38A8A6NNN8 435 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 AP1G2O75843 785 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 RTN3O95197 1032 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 LETM1O95202 739 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 VNN2O95498 520 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CEBPBP17676 345 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 ATF6P18850 670 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CTHP32929 405 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 AVPR1AP37288 418 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 ASPAP45381 313 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 PPP3CCP48454 512 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 EPHA5P54756 1037 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 MARSP56192 900 aaKnown RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 LRMPQ12912 555 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CUL2Q13617 745 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TEAD2Q15562 447 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 STX1AQ16623 288 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 PTPRNQ16849 979 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 DPCR1Q3MIW9 517 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CBWD6Q4V339 395 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CBWD3Q5JTY5 395 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CBWD5Q5RIA9 395 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SCARA3Q6AZY7 606 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 DENND5BQ6ZUT9 1274 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TRIM59Q8IWR1 403 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CRYBG2Q8N1P7 616 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 PPM1KQ8N3J5 372 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SLC44A3Q8N4M1 653 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TTC9BQ8N6N2 239 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 ZSCAN18Q8TBC5 510 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 GPT2Q8TD30 523 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 GPR152Q8TDT2 470 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SMARCD1Q96GM5 515 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 C8orf48Q96LL4 319 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 HEXIM2Q96MH2 286 aaKnown RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 SLITRK1Q96PX8 696 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 BCO2Q9BYV7 579 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 DPEP3Q9H4B8 488 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 EPHX3Q9H6B9 360 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 DMAP1Q9NPF5 467 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 CISHQ9NSE2 258 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 THG1LQ9NWX6 298 aaKnown RBP8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TRPM5Q9NZQ8 1165 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 HESX1Q9UBX0 185 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 COQ4Q9Y3A0 265 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 NUMBLQ9Y6R0 609 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
PSEN1-223ENST00000557511 TMEM221A6NGB7 291 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SOBPA7XYQ1 873 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PRR33A8MZF0 331 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ANHXE9PGG2 379 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 F8VP50 259 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 M0R296 226 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PMM2O15305 246 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 HCRTO43612 131 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 GPR37L1O60883 481 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 CILPO75339 1184 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ECI2O75521 394 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 NOL4O94818 638 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ABL1P00519 1130 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SRFP11831 508 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 CD19P15391 556 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 GJA1P17302 382 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 CDK11BP21127 795 aaKnown RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 ADORA2BP29275 332 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 GPR15P49685 360 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 INCA1Q0VD86 236 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 IFRD2Q12894 506 aaPredicted RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 FOXC1Q12948 553 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 HTR4Q13639 388 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 LAPTM4AQ15012 233 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SLC5A9Q2M3M2 681 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SDHAF4Q5VUM1 108 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PARM1Q6UWI2 310 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 GBP6Q6ZN66 633 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 FAM35AQ86V20 835 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 TMC8Q8IU68 726 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 NUP93Q8N1F7 819 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 STKLD1Q8NE28 680 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PDZD8Q8NEN9 1154 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SHKBP1Q8TBC3 707 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms