RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 EFCAB12Q6NXP0 572 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PPP1R2P3Q6NXS1 205 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 C1orf228Q6PIY5 440 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 CCDC33Q8N5R6 958 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 SPATA18Q8TC71 538 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 MAGEC3Q8TD91 643 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 KCNV2Q8TDN2 545 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 NSMCE1Q8WV22 266 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PTPRN2Q92932 1015 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 SPATA33Q96N06 139 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 MYCBPQ99417 103 aaPredicted RBP18.56■□□□□ 0.56
XRCC3-218ENST00000557439 CXorf56Q9H5V9 222 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 STARD13Q9Y3M8 1113 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PROZP22891 400 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 ARL4CP56559 192 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 RIOX2Q8IUF8 465 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 PALM2Q8IXS6 379 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 FGD4Q96M96 766 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 RNPEPQ9H4A4 650 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 YY1AP1Q9H869 796 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 RNF19AQ9NV58 838 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 STRIP2Q9ULQ0 834 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 USP18Q9UMW8 372 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 FAM155BO75949 473 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 CCNB1P14635 433 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 TAP1Q03518 808 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 PTPN11Q06124 597 aaPredicted RBP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 NR1H3Q13133 447 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 RIPK1Q13546 671 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 HADHQ16836 314 aaKnown RBP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 TSHZ1Q6ZSZ6 1077 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 MOB2Q70IA6 237 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 POLNQ7Z5Q5 900 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 L3MBTL3Q96JM7 780 aaPredicted RBP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 LRRC37BQ96QE4 947 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 RPF1Q9H9Y2 349 aaKnown RBP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.55■□□□□ 0.56
XRCC3-218ENST00000557439 CENPFP49454 3210 aa18.55■□□□□ 0.56
XRCC3-218ENST00000557439 PAPPA2Q9BXP8 1791 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ACKR2O00590 384 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 MAGEB2O15479 319 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 KRT7P08729 469 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 POLR2BP30876 1174 aaKnown RBP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ELK3P41970 407 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 RGS7P49802 495 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ATP11AP98196 1134 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ACVR2BQ13705 512 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 Q3C1V9 767 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 AGGF1Q8N302 714 aaeCLIP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 C12orf29Q8N999 325 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ATP11CQ8NB49 1132 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 RFWD2Q8NHY2 731 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 C10orf82Q8WW14 230 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 CXCL16Q9H2A7 254 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 SMG5Q9UPR3 1016 aaKnown RBP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 IRF6O14896 467 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 DIAPH2O60879 1101 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 T-ENOLP0DO92 83 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 CYP3A5P20815 502 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 ELF1P32519 619 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 CDH6P55285 790 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 GRM1Q13255 1194 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 CEP128Q6ZU80 1094 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 DCAKDQ8WVC6 231 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 OTUD5Q96G74 571 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 HEXIM2Q96MH2 286 aaKnown RBP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 TRIM56Q9BRZ2 755 aaKnown RBP18.54■□□□□ 0.56
XRCC3-218ENST00000557439 SLC24A2Q9UI40 661 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 USH1CQ9Y6N9 552 aa18.54■□□□□ 0.56
XRCC3-218ENST00000557439 IGKV6-21A0A0C4DH24 114 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 C2orf71A6NGG8 1288 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 B4GALT4O60513 344 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 TRUB2O95900 331 aaKnown RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 ALADP13716 330 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 MZB1Q8WU39 189 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 GRAMD1AQ96CP6 724 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 PLCD4Q9BRC7 762 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 ADPGKQ9BRR6 497 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 FZD8Q9H461 694 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 STAG3L1P0CL83 205 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 DPYSL3Q14195 570 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 SETDB1Q15047 1291 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 CELF3Q5SZQ8 465 aaKnown RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 DARS2Q6PI48 645 aaKnown RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 LRRC6Q86X45 466 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 PRR11Q96HE9 360 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 CLMNQ96JQ2 1002 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 SERAC1Q96JX3 654 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 BCO2Q9BYV7 579 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 MAGEB5Q9BZ81 275 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 ACSS3Q9H6R3 686 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 ELP3Q9H9T3 547 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms