RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 CBWD5Q5RIA9 395 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 C1orf146Q5VVC0 180 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 FBXL19Q6PCT2 694 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 NANOGNBQ7Z5D8 188 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 TREML1Q86YW5 311 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 FAM186BQ8IYM0 893 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 ZNF564Q8TBZ8 553 aaPredicted RBP10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 RPGRQ92834 1020 aaKnown RBP10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 PIGSQ96S52 555 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 SIKE1Q9BRV8 207 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 HERPUD2Q9BSE4 406 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 MRPS26Q9BYN8 205 aaKnown RBP10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 ZNHIT2Q9UHR6 403 aa10.95□□□□□ -0.66
SUPT16H-207ENST00000557394 NFASCO94856 1347 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 FAM170AA1A519 330 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 F5H6K3 240 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 DENRO43583 198 aaKnown RBP10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CLPTM1O96005 669 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CD48P09326 243 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 DHRS4L1P0CG22 281 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 PLS3P13797 630 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 KRT4P19013 534 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 KLRC2P26717 231 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 GYG1P46976 350 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CPA2P48052 419 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CREB5Q02930 508 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 SPIDRQ14159 915 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 MMEL1Q495T6 779 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 TRIM67Q6ZTA4 783 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 DEFB132Q7Z7B7 95 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 NLRX1Q86UT6 975 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CROCCP3Q8IVE0 287 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 CLPTM1LQ96KA5 538 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 BTBD6Q96KE9 485 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 PCDHB18PQ96TA0 734 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 NUP85Q9BW27 656 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 SENP6Q9GZR1 1112 aaPredicted RBP10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 NYXQ9GZU5 481 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 RIOX1Q9H6W3 641 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 TAGLN3Q9UI15 199 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 R3HDM2Q9Y2K5 976 aaKnown RBP10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 TMED5Q9Y3A6 229 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 MYO3BQ8WXR4 1341 aa10.94□□□□□ -0.66
SUPT16H-207ENST00000557394 ARHGAP10A1A4S6 786 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CLIC2O15247 247 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ATMINO43313 823 aaPredicted RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 KDM1AO60341 852 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 PCSK6P29122 969 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SLC5A2P31639 672 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 HOXD12P35452 270 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 NEK2P51955 445 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ARHGAP44Q17R89 818 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MYLK3Q32MK0 819 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 PPP4R4Q6NUP7 873 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 BANPQ8N9N5 519 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 LMO3Q8TAP4 145 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MZB1Q8WU39 189 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ALKBH8Q96BT7 664 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 C8orf48Q96LL4 319 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 REEP2Q9BRK0 252 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 THTPAQ9BU02 230 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ARMCX1Q9P291 453 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CHORDC1Q9UHD1 332 aaPredicted RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ADAMTS6Q9UKP5 1117 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SNX5Q9Y5X3 404 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 ATRNL1Q5VV63 1379 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 A0A088AWK7 358 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 WDR91A4D1P6 747 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 TMEM247A6NEH6 219 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SPECC1L-ADORA2AF8WAN1 911 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 TNFRSF10BO14763 440 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MED24O75448 989 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 TRMUO75648 421 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 TSPY3P0CV98 308 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 TSPY8P0CW00 308 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MYL2P10916 166 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SLC1A1P43005 524 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CENPAP49450 140 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 MTTPP55157 894 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CBLBQ13191 982 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 KLF1Q13351 362 aaPredicted RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SF3B3Q15393 1217 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 SLC15A2Q16348 729 aa10.93□□□□□ -0.66
SUPT16H-207ENST00000557394 CCNG2Q16589 344 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms