RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CTBP1Q13363 440 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 PIN1Q13526 163 aaPredicted RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 CYP1B1Q16678 543 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 L1TD1Q5T7N2 865 aaKnown RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 LMBRD2Q68DH5 695 aaPredicted RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 B3GNT9Q6UX72 402 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 ZNF783Q6ZMS7 281 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 DAAM2Q86T65 1068 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 CAND1Q86VP6 1230 aaKnown RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 IZUMO1Q8IYV9 350 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 PPP1R35Q8TAP8 253 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 JPH3Q8WXH2 748 aaPredicted RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 AIFM3Q96NN9 605 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 FCRL4Q96PJ5 515 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 SNX18Q96RF0 628 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 CAMKK2Q96RR4 588 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 ACO2Q99798 780 aaKnown RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 DPCDQ9BVM2 203 aaPredicted RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 NMRK2Q9NPI5 230 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 PDGFCQ9NRA1 345 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 TRMT13Q9NUP7 481 aaKnown RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.26□□□□□ -1.57
VRK1-207ENST00000557352 ZNF180Q9UJW8 692 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 SNX14Q9Y5W7 946 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 FER1L4A9Z1Z3 1794 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 CYP2D7A0A087X1C5 515 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 A0A1W2PPL8 197 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 KCNU1A8MYU2 1149 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 POC1B-GALNT4F8VUJ3 575 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 BTN3A1O00481 513 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 AKAP10O43572 662 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 PRKCBP05771 671 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 HSPA6P17066 643 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 ARHGAP25P42331 645 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 DAZAP2Q15038 168 aaPredicted RBP5.25□□□□□ -1.57
VRK1-207ENST00000557352 PLA1AQ53H76 456 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 TPH2Q8IWU9 490 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 GALNT4Q8N4A0 578 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 ZBTB9Q96C00 473 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 LRGUKQ96M69 825 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 RTFDC1Q9BY42 306 aaPredicted RBP5.25□□□□□ -1.57
VRK1-207ENST00000557352 DPH1Q9BZG8 443 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 CIPCQ9C0C6 399 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 MS4A7Q9GZW8 240 aaPredicted RBP5.25□□□□□ -1.57
VRK1-207ENST00000557352 ZMAT3Q9HA38 289 aaKnown RBP5.25□□□□□ -1.57
VRK1-207ENST00000557352 TBC1D30Q9Y2I9 924 aa5.25□□□□□ -1.57
VRK1-207ENST00000557352 E2F8A0AVK6 867 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 ANKRD62A6NC57 917 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 AP4M1O00189 453 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 PPEF2O14830 753 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 KITP10721 976 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 FPR3P25089 353 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 RAB27AP51159 221 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 RENBPP51606 427 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 PRKAG1P54619 331 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 E2F1Q01094 437 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 RNASE12Q5GAN4 147 aaKnown RBP5.24□□□□□ -1.57
VRK1-207ENST00000557352 DPY19L3Q6ZPD9 716 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 OR6B3Q8NGW1 331 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 BPIFB1Q8TDL5 484 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 PPP2R3CQ969Q6 453 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 C17orf80Q9BSJ5 609 aa5.24□□□□□ -1.57
VRK1-207ENST00000557352 SPRTNQ9H040 489 aaPredicted RBP5.24□□□□□ -1.57
VRK1-207ENST00000557352 WDR17Q8IZU2 1322 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 TCRBV5S1A1TA0A578 114 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 TMEM233B4DJY2 109 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 BMP15O95972 392 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 PDGFRBP09619 1106 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 CYP2A6P11509 494 aaPredicted RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 MMP13P45452 471 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 ALDH5A1P51649 535 aaPredicted RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 AGFG1P52594 562 aaKnown RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 MAPK7Q13164 816 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 SLC13A2Q13183 592 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 PTCHD3Q3KNS1 767 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 CERKLQ49MI3 558 aaPredicted RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 MIS18BP1Q6P0N0 1132 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 COL23A1Q86Y22 540 aaPredicted RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 CNGA4Q8IV77 575 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 TMEM171Q8WVE6 324 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 RAPGEF4Q8WZA2 1011 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 RSPRY1Q96DX4 576 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 PRR25Q96S07 402 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 VPS16Q9H269 839 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 SMURF2Q9HAU4 748 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 GBA2Q9HCG7 927 aaPredicted RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 ANLNQ9NQW6 1124 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 DDX56Q9NY93 547 aaKnown RBP5.23□□□□□ -1.57
VRK1-207ENST00000557352 ELOVL5Q9NYP7 299 aa5.23□□□□□ -1.57
VRK1-207ENST00000557352 hCG_2014768A0A024R1R8 64 aa5.22□□□□□ -1.57
VRK1-207ENST00000557352 BCAR3O75815 825 aa5.22□□□□□ -1.57
VRK1-207ENST00000557352 USP1O94782 785 aa5.22□□□□□ -1.57
VRK1-207ENST00000557352 CHRM5P08912 532 aaPredicted RBP5.22□□□□□ -1.57
VRK1-207ENST00000557352 MYCLP12524 364 aaPredicted RBP5.22□□□□□ -1.57
VRK1-207ENST00000557352 ANAPC15P60006 121 aa5.22□□□□□ -1.57
VRK1-207ENST00000557352 ANO6Q4KMQ2 910 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms