RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 A0A1B0GUA9 196 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 RNF8O76064 485 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 SSTR1P30872 391 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 BASP1P80723 227 aaKnown RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 ZC3H12AQ5D1E8 599 aaKnown RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 CATSPER4Q7RTX7 472 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 SHCBP1Q8NEM2 672 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 RSAD2Q8WXG1 361 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 NFKBIZQ9BYH8 718 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 BARX2Q9UMQ3 279 aaPredicted RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 PFKMP08237 780 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 GCAP28676 217 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-214ENST00000557258 HIC1Q14526 733 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 NUGGCQ68CJ6 796 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 SPATA18Q8TC71 538 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 CLEC4CQ8WTT0 213 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 ZC3H15Q8WU90 426 aaKnown RBP20.21■□□□□ 0.83
FOXN3-214ENST00000557258 PTPN18Q99952 460 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 ASB7Q9H672 318 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 KRT7P08729 469 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 ATXN1P54253 815 aaKnown RBP20.21■□□□□ 0.83
FOXN3-214ENST00000557258 RBP5P82980 135 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 LMNB2Q03252 620 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 ACVR2BQ13705 512 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 FAM187BQ17R55 369 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 ZNF618Q5T7W0 954 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 PRCCQ92733 491 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-214ENST00000557258 CPA4Q9UI42 421 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 KAT6AQ92794 2004 aa20.21■□□□□ 0.83
FOXN3-214ENST00000557258 C5orf60A6NFR6 353 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 RPL22P35268 128 aaKnown RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 EIF3EP60228 445 aaKnown RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 TTC30AQ86WT1 665 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 BBOF1Q8ND07 529 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 CENPTQ96BT3 561 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 L3MBTL3Q96JM7 780 aaPredicted RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 NT5C1AQ9BXI3 368 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 HEY1Q9Y5J3 304 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 ITGAVP06756 1048 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 FAXCQ5TGI0 409 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 NETO2Q8NC67 525 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 OR6B3Q8NGW1 331 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 CPT1BQ92523 772 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 SPOCK2Q92563 424 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 CDH16O75309 829 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 TMEM63AO94886 807 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 RBP3P10745 1247 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 VDRP11473 427 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 P4HA1P13674 534 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 IBSPP21815 317 aaPredicted RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 COPS2P61201 443 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 FAM47EQ6ZV65 393 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 POLNQ7Z5Q5 900 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 CCDC197Q8NCU1 140 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 TMEM40Q8WWA1 233 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 NKD2Q969F2 451 aaPredicted RBP20.2■□□□□ 0.82
FOXN3-214ENST00000557258 MCRS1Q96EZ8 462 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 TINF2Q9BSI4 451 aa20.2■□□□□ 0.82
FOXN3-214ENST00000557258 AVILO75366 819 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 CCDC130P13994 396 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 KRT15P19012 456 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 ADORA2BP29275 332 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 ZNF268Q14587 947 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 CA9Q16790 459 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 FAM133BQ5BKY9 247 aaKnown RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 PPP6R3Q5H9R7 873 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 WDR83Q9BRX9 315 aaKnown RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 C12orf65Q9H3J6 166 aaKnown RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 F5H423 210 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 HIF1AQ16665 826 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 DGKDQ16760 1214 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 BBS9Q3SYG4 887 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 CYP4V2Q6ZWL3 525 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 DNAJB3Q8WWF6 145 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
FOXN3-214ENST00000557258 PCDH9Q9HC56 1237 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 SAMD15Q9P1V8 674 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 ITGA11Q9UKX5 1188 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 NR2E3Q9Y5X4 410 aa20.19■□□□□ 0.82
FOXN3-214ENST00000557258 CITO14578 2027 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 DOCK3Q8IZD9 2030 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 A0A1W2PPM1 405 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 HMGCRP04035 888 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 GPD1P21695 349 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
FOXN3-214ENST00000557258 STX2P32856 288 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 BEX3Q00994 111 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 DUSP28Q4G0W2 176 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 DRICH1Q6PGQ1 229 aaPredicted RBP20.18■□□□□ 0.82
FOXN3-214ENST00000557258 BBS12Q6ZW61 710 aa20.18■□□□□ 0.82
FOXN3-214ENST00000557258 CROCCP2Q86T23 111 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms