RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 FAM200BP0CF97 657 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 PSMC3P17980 439 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 RAD23BP54727 409 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 GRM2Q14416 872 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 ZNF394Q53GI3 561 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 CCDC183Q5T5S1 534 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 TXNDC8Q6A555 127 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 MFSD6LQ8IWD5 586 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 CMTM8Q8IZV2 173 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 SIX5Q8N196 739 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 NUP93Q8N1F7 819 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 UBR7Q8N806 425 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 SLC4A11Q8NBS3 891 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 ZMIZ2Q8NF64 920 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 CYFIP2Q96F07 1278 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 TMEM176AQ96HP8 235 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 SMOQ99835 787 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 TRMT61BQ9BVS5 477 aaKnown RBP24.24■■□□□ 1.47
TDP1-216ENST00000556867 KMT2EQ8IZD2 1858 aa24.24■■□□□ 1.47
TDP1-216ENST00000556867 KRBA1A5PL33 1030 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 TNFRSF10BO14763 440 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 RTN3O95197 1032 aaPredicted RBP24.23■■□□□ 1.47
TDP1-216ENST00000556867 ADORA2BP29275 332 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 FAM114A1Q8IWE2 563 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 SUGP1Q8IWZ8 645 aaKnown RBP24.23■■□□□ 1.47
TDP1-216ENST00000556867 MAB21L3Q8N8X9 362 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 EHBP1Q8NDI1 1231 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 DNASE1L2Q92874 299 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 ARHGEF3Q9NR81 526 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 CA14Q9ULX7 337 aa24.23■■□□□ 1.47
TDP1-216ENST00000556867 KIF26AQ9ULI4 1882 aaPredicted RBP24.23■■□□□ 1.47
TDP1-216ENST00000556867 COL4A2P08572 1712 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 DPYSL4O14531 572 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 AVPR1AP37288 418 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 PPP3CCP48454 512 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 SLC5A3P53794 718 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 FCHO2Q0JRZ9 810 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 HEXIM2Q96MH2 286 aaKnown RBP24.22■■□□□ 1.47
TDP1-216ENST00000556867 INTS2Q9H0H0 1204 aaKnown RBP24.22■■□□□ 1.47
TDP1-216ENST00000556867 MFSD1Q9H3U5 465 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 COMMD8Q9NX08 183 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 IL37Q9NZH6 218 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 TRPM5Q9NZQ8 1165 aa24.22■■□□□ 1.47
TDP1-216ENST00000556867 BEST1O76090 585 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 PFKLP17858 780 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 MTIF2P46199 727 aaKnown RBP24.21■■□□□ 1.47
TDP1-216ENST00000556867 MAP3K7CLP57077 242 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 PPP1R26Q5T8A7 1209 aaPredicted RBP24.21■■□□□ 1.47
TDP1-216ENST00000556867 CLEC20AQ6ZU45 233 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 CREBRFQ8IUR6 639 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 GPIHBP1Q8IV16 184 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 PPM1KQ8N3J5 372 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 CELF5Q8N6W0 485 aaKnown RBP24.21■■□□□ 1.47
TDP1-216ENST00000556867 SLITRK1Q96PX8 696 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 SMG9Q9H0W8 520 aaKnown RBP24.21■■□□□ 1.47
TDP1-216ENST00000556867 BRD9Q9H8M2 597 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 KIF9Q9HAQ2 790 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 GCNT4Q9P109 453 aa24.21■■□□□ 1.47
TDP1-216ENST00000556867 HELZP42694 1942 aaKnown RBP24.2■■□□□ 1.46
TDP1-216ENST00000556867 TRAV19A0A0A6YYK7 116 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 FAM92AA1XBS5 289 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 NPR3P17342 541 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 YWHAQP27348 245 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 GDI1P31150 447 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 GCNT1Q02742 428 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 TAF10Q12962 218 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 ZNF268Q14587 947 aaPredicted RBP24.2■■□□□ 1.46
TDP1-216ENST00000556867 ARHGAP17Q68EM7 881 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 CWF19L1Q69YN2 538 aaKnown RBP24.2■■□□□ 1.46
TDP1-216ENST00000556867 SASS6Q6UVJ0 657 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 PDZD8Q8NEN9 1154 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 OVCA2Q8WZ82 227 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 IRF7Q92985 503 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 USP13Q92995 863 aaPredicted RBP24.2■■□□□ 1.46
TDP1-216ENST00000556867 LRRC3BQ96PB8 259 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 TRPC7Q9HCX4 862 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 PNPLA8Q9NP80 782 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 TRPV5Q9NQA5 729 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 TICRRQ7Z2Z1 1910 aa24.2■■□□□ 1.46
TDP1-216ENST00000556867 GTPBP10A4D1E9 387 aaKnown RBP24.19■■□□□ 1.46
TDP1-216ENST00000556867 ZNF840PA6NDX5 716 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 ZNF263O14978 683 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 CHADO15335 359 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 ACO1P21399 889 aaKnown RBP24.19■■□□□ 1.46
TDP1-216ENST00000556867 PDE6CP51160 858 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 IFRD2Q12894 506 aaPredicted RBP24.19■■□□□ 1.46
TDP1-216ENST00000556867 MLF2Q15773 248 aaPredicted RBP24.19■■□□□ 1.46
TDP1-216ENST00000556867 STX1AQ16623 288 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 MAN2A1Q16706 1144 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 IER5LQ5T953 404 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 ARHGEF19Q8IW93 802 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 YAF2Q8IY57 180 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 SCAMP5Q8TAC9 235 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 ENOX1Q8TC92 643 aaKnown RBP24.19■■□□□ 1.46
TDP1-216ENST00000556867 BPIFB1Q8TDL5 484 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 KAT5Q92993 513 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 FBXO32Q969P5 355 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 DUSP16Q9BY84 665 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 TDP1Q9NUW8 608 aa24.19■■□□□ 1.46
TDP1-216ENST00000556867 ANO10Q9NW15 660 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms