RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NAMPTP43490 491 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 STT3AP46977 705 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 MARCKSL1P49006 195 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 ACOT2P49753 483 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 PEX5P50542 639 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 MXRA7P84157 204 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 GUCY2DQ02846 1103 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 SMAD4Q13485 552 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 ZACNQ401N2 412 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 TJAP1Q5JTD0 557 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 WDR45BQ5MNZ6 344 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 TDRD10Q5VZ19 366 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 GADL1Q6ZQY3 521 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 MILR1Q7Z6M3 343 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 ZDHHC14Q8IZN3 488 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 SYCE1Q8N0S2 351 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 GDAP1Q8TB36 358 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 FAM71BQ8TC56 605 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 CD101Q93033 1021 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 DCPSQ96C86 337 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 TBCBQ99426 244 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 DDX47Q9H0S4 455 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 EPB41L5Q9HCM4 733 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 MRPL40Q9NQ50 206 aaKnown RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 VPS18Q9P253 973 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 FBXO40Q9UH90 709 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 TTC7AQ9ULT0 858 aaPredicted RBP5.34□□□□□ -1.56
TMEM260-210ENST00000556422 NFU1Q9UMS0 254 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 SH3GLB1Q9Y371 365 aa5.34□□□□□ -1.56
TMEM260-210ENST00000556422 CNTNAP2Q9UHC6 1331 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 DOCK3Q8IZD9 2030 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM238LA0A1B0GVL6 79 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 POM121CA8CG34 1229 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 C4BPAP04003 597 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GZMAP12544 262 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SLC8A1P32418 973 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GJA5P36382 358 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ETV3P41162 512 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GCNT1Q02742 428 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GNA13Q14344 377 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CCDC153Q494R4 210 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 EMBQ6PCB8 327 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 POMZP3Q6PJE2 187 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 METTL7BQ6UX53 244 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ERO1BQ86YB8 467 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 KLHL7Q8IXQ5 586 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 RSAD2Q8WXG1 361 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 KRT35Q92764 455 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CDCA5Q96FF9 252 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 IFT74Q96LB3 600 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 TTC1Q99614 292 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SH3GL2Q99962 352 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 OXCT2Q9BYC2 517 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 VPS37BQ9H9H4 285 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ERVK-5Q9HDB9 667 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 C8orf4Q9NR00 106 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 AGTPBP1Q9UPW5 1226 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 A0A0B4J269 797 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 LRRD1A4D1F6 860 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 E2F3O00716 465 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ABLIM1O14639 778 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 MSCO60682 206 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 RNF40O75150 1001 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GGPS1O95749 300 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GRK2P25098 689 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 MTHFRP42898 656 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 VPS41P49754 854 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 MFAP3P55082 362 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CDR2Q01850 454 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SPOPLQ6IQ16 392 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 GPAT2Q6NUI2 795 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 C11orf63Q6NUN7 778 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 BEND5Q7L4P6 421 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 RHOT2Q8IXI1 618 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 DEPTORQ8TB45 409 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 OSCP1Q8WVF1 389 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SEC14L1Q92503 715 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 OPTNQ96CV9 577 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SELENOSQ9BQE4 189 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 TARS2Q9BW92 718 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CARD9Q9H257 536 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 NEUROG2Q9H2A3 272 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 APOBEC3GQ9HC16 384 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 PREBQ9HCU5 417 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 AGO2Q9UKV8 859 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ALG6Q9Y672 507 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 LRRIQ4A6NIV6 560 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF233A6NK53 670 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 MAFO75444 373 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 UNGP13051 313 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF3P17036 446 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 ACO1P21399 889 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 IREB2P48200 963 aaKnown RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 CTCFP49711 727 aaPredicted RBP5.33□□□□□ -1.56
TMEM260-210ENST00000556422 LIG4P49917 911 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 STAT5BP51692 787 aa5.33□□□□□ -1.56
TMEM260-210ENST00000556422 SP140Q13342 867 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms