RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	RFC2	P35250	354 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	SLC26A2	P50443	739 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	CLCN3	P51790	818 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	POLG	P54098	1239 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	NPEPPS	P55786	919 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	NLRP11	P59045	1033 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	GABRE	P78334	506 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	DLG4	P78352	724 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MRPS6	P82932	125 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	PRKCE	Q02156	737 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	BECN1	Q14457	450 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	DHX8	Q14562	1220 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	KIZ	Q2M2Z5	673 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	XKR3	Q5GH77	459 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MARCH8	Q5T0T0	291 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	PLA2G4F	Q68DD2	849 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	FAM173B	Q6P4H8	233 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	SESTD1	Q86VW0	696 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	RHPN2	Q8IUC4	686 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	NME8	Q8N427	588 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	DBF4B	Q8NFT6	615 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	ETNPPL	Q8TBG4	499 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	PIGO	Q8TEQ8	1089 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	SEPT8	Q92599	483 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMEM143	Q96AN5	459 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	CDK5RAP3	Q96JB5	506 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MAP7D2	Q96T17	732 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	JAM3	Q9BX67	310 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	CELF4	Q9BZC1	486 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	RAB34	Q9BZG1	259 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	CERS4	Q9HA82	394 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	POLD4	Q9HCU8	107 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	LRWD1	Q9UFC0	647 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MBD1	Q9UIS9	605 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	BRCA2	P51587	3418 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	RALGAPA2	Q2PPJ7	1873 aa		5.15	□□□□□ -1.58
ATXN3-238	ENST00000556288	MYH10	P35580	1976 aa		5.15	□□□□□ -1.58
ATXN3-238	ENST00000556288	IGKV6D-21	A0A0A0MT36	114 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SMIM35	A0A1B0GVV1	85 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	DENND3	A2RUS2	1198 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	AQP7	O14520	342 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	STX6	O43752	255 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	NBN	O60934	754 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SEMA7A	O75326	666 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CSDE1	O75534	798 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	RPS6KA5	O75582	802 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	DGKI	O75912	1065 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SLITRK3	O94933	977 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	PARN	O95453	639 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	AMH	P03971	560 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	MYOG	P15173	224 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	ATP2A2	P16615	1042 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	NCL	P19338	710 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	FGFR4	P22455	802 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	MARCKS	P29966	332 aa	Predicted RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CDC25A	P30304	524 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CD52	P31358	61 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	YWHAB	P31946	246 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	TOB1	P50616	345 aa	Predicted RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	NCKAP1L	P55160	1127 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	GUCY1A3	Q02108	690 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	PPP2R5C	Q13362	524 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SQSTM1	Q13501	440 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CUL4A	Q13619	759 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	ZNF124	Q15973	351 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	LONRF3	Q496Y0	759 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	RILPL1	Q5EBL4	403 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SPOUT1	Q5T280	376 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	KRT79	Q5XKE5	535 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	TAF2	Q6P1X5	1199 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CNKSR3	Q6P9H4	555 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	ATG14	Q6ZNE5	492 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288		Q7L0L9	218 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	MTDH	Q86UE4	582 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	DCP2	Q8IU60	420 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	KIAA0319L	Q8IZA0	1049 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	MYOCD	Q8IZQ8	938 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288		Q8N1Y9	231 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	DEFB123	Q8N688	67 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	RNF169	Q8NCN4	708 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	RDM1	Q8NG50	284 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	PPM1E	Q8WY54	764 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	HERVK_113	Q902F9	699 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SEC14L1	Q92503	715 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	SNX21	Q969T3	373 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	NLRP4	Q96MN2	994 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	MBOAT7	Q96N66	472 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CTAGE1	Q96RT6	745 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	KCNJ15	Q99712	375 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	LXN	Q9BS40	222 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	KRTAP9-3	Q9BYQ3	159 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	IFIH1	Q9BYX4	1025 aa	Known RBP	5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	PANK2	Q9BZ23	570 aa		5.15	□□□□□ -1.59
ATXN3-238	ENST00000556288	CDIP1	Q9H305	208 aa		5.15	□□□□□ -1.59

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