RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.62■□□□□ 0.73
SDR39U1-218ENST00000556262 INPPL1O15357 1258 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 LRCH4O75427 683 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 DDHD2O94830 711 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 FLT3P36888 993 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 LHX1P48742 406 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 TCTN1Q2MV58 587 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 PLEKHG4Q58EX7 1191 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 ZFYVE27Q5T4F4 411 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 GOLGA6L1Q8N7Z2 621 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 STK32AQ8WU08 396 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 CAVIN3Q969G5 261 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 RNF25Q96BH1 459 aaPredicted RBP19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 GDAP1L1Q96MZ0 367 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 HNRNPABQ99729 332 aaKnown RBP19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 DNAI2Q9GZS0 605 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 SLITRK6Q9H5Y7 841 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 LCMT1Q9UIC8 334 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 MYBPHLA2RUH7 354 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 PITPNM1O00562 1244 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 FSCN2O14926 492 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 BEST1O76090 585 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 RALAP11233 206 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 LCP1P13796 627 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 CARSP49589 748 aaKnown RBP19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 SH3PXD2AQ5TCZ1 1133 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 RXFP2Q8WXD0 754 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 SYT15Q9BQS2 421 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 GDF3Q9NR23 364 aa19.61■□□□□ 0.73
SDR39U1-218ENST00000556262 LAMA2P24043 3122 aaKnown RBP19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 C2CD4BA6NLJ0 364 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 ENPP3O14638 875 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 HSPA6P17066 643 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 IL1R2P27930 398 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 CCL23P55773 120 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 SLC6A3Q01959 620 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 SMTNL2Q2TAL5 461 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 RAB6CQ53S08 254 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 NOMO2Q5JPE7 1267 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 TTC27Q6P3X3 843 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 IFT20Q8IY31 132 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 EXD1Q8NHP7 514 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 CASKIN2Q8WXE0 1202 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 IFT81Q8WYA0 676 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 KHSRPQ92945 711 aaKnown RBP eCLIP19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 MAGOHBQ96A72 148 aaKnown RBP19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 RTP3Q9BQQ7 232 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 MED10Q9BTT4 135 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 RAB6CQ9H0N0 254 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 ZWILCHQ9H900 591 aa19.6■□□□□ 0.73
SDR39U1-218ENST00000556262 PHF2O75151 1096 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 ODC1P11926 461 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 PDGFRAP16234 1089 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 ZNF143P52747 638 aaPredicted RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 RABGGTBP53611 331 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 SLC25A11Q02978 314 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 C15orf59Q2T9L4 293 aaPredicted RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 KCNT1Q5JUK3 1230 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 LRRC38Q5VT99 294 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 CCDC26Q8TAB7 109 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.59■□□□□ 0.732e-7■■■■■ 32.7
SDR39U1-218ENST00000556262 RAPGEF5Q92565 580 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 UROC1Q96N76 676 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 DUSP16Q9BY84 665 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 PPP1R12CQ9BZL4 782 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 PCSK1NQ9UHG2 260 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 MTUS1Q9ULD2 1270 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 RNF40O75150 1001 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 SYF2O95926 243 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 KRT1P04264 644 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 GPD1P21695 349 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 LMAN1P49257 510 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 DCLRE1AQ6PJP8 1040 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 MAATS1Q7Z4T9 603 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 PIGZQ86VD9 579 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 EIF1ADQ8N9N8 165 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 DIS3LQ8TF46 1054 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 C1orf54Q8WWF1 131 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 RSPH1Q8WYR4 309 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 PCED1BQ96HM7 432 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 CFAP57Q96MR6 1250 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 TRIM51Q9BSJ1 452 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 OSBPL8Q9BZF1 889 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 TBC1D13Q9NVG8 400 aa19.59■□□□□ 0.73
SDR39U1-218ENST00000556262 TSC2P49815 1807 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 NPR3P17342 541 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 RPL34P49207 117 aaKnown RBP19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 RNASELQ05823 741 aaKnown RBP19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 ADCY2Q08462 1091 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 FAAP100Q0VG06 881 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 CDO1Q16878 200 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 TRIM60Q495X7 471 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 MFSD7Q6UXD7 560 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 CLEC20AQ6ZU45 233 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 DDX42Q86XP3 938 aaKnown RBP eCLIP19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 URGCPQ8TCY9 931 aa19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 NDRG1Q92597 394 aaKnown RBP19.58■□□□□ 0.73
SDR39U1-218ENST00000556262 ZBTB9Q96C00 473 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms