RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 DDR2Q16832 855 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ARHGAP29Q52LW3 1261 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CBWD2Q8IUF1 395 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 HSCBQ8IWL3 235 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 SCN4BQ8IWT1 228 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ADGRF2Q8IZF7 708 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CMTM8Q8IZV2 173 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 LRRC52Q8N7C0 313 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 MAB21L3Q8N8X9 362 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 IQUBQ8NA54 791 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ZSCAN1Q8NBB4 408 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 SUMF1Q8NBK3 374 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 BPIFB1Q8TDL5 484 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 BAP1Q92560 729 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 MRPS31Q92665 395 aaKnown RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 HPDLQ96IR7 371 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 LRRC3BQ96PB8 259 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 OCSTAMPQ9BR26 566 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 SLC46A2Q9BY10 475 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 TRIM9Q9C026 710 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 CHRDQ9H2X0 955 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 C8orf33Q9H7E9 229 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 INTS13Q9NVM9 706 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 THG1LQ9NWX6 298 aaKnown RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 ZSCAN32Q9NX65 697 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 DLL3Q9NYJ7 618 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 GTF3C4Q9UKN8 822 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 SMG5Q9UPR3 1016 aaKnown RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 MORC2Q9Y6X9 1032 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PTPRDP23468 1912 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PTPRJQ12913 1337 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 PKD1L2Q7Z442 2459 aa7.18□□□□□ -1.26
PSEN1-216ENST00000556066 HELZP42694 1942 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 KIAA0391O15091 583 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CLIC2O15247 247 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 HCRTO43612 131 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ATP2C2O75185 946 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 YEATS4O95619 227 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CSH1P0DML2 217 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CSH2P0DML3 217 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 DLATP10515 647 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CHRNB1P11230 501 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 HMGA1P17096 107 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TNNI1P19237 187 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 PCSK1P29120 753 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CASP1P29466 404 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 HOXD13P35453 343 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SOX11P35716 441 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 AFMP43652 599 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CXCL12P48061 93 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ME1P48163 572 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 LHX1P48742 406 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CYP2J2P51589 502 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CCR3P51677 355 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 NRLP54845 237 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 PSMC1P62191 440 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 RPL10AP62906 217 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SATB1Q01826 763 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 LRRC32Q14392 662 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 PON2Q15165 354 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SURF1Q15526 300 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 LPAL2Q16609 132 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CCDC142Q17RM4 750 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SOWAHAQ2M3V2 549 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 FAM26FQ5R3K3 315 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TXNDC8Q6A555 127 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 HEATR6Q6AI08 1181 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TXNDC11Q6PKC3 985 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SHC4Q6S5L8 630 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TMEM150AQ86TG1 271 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 OSTM1Q86WC4 334 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 RALGPS2Q86X27 583 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SPATA2LQ8IUW3 424 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 NELFCDQ8IXH7 590 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TMEM86AQ8N2M4 240 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CELF5Q8N6W0 485 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ZBTB44Q8NCP5 570 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 OR5B17Q8NGF7 314 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SECISBP2LQ93073 1101 aaKnown RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SNX21Q969T3 373 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CCDC127Q96BQ5 260 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 MMS19Q96T76 1030 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ACBD6Q9BR61 282 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 BLZF1Q9H2G9 400 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 CUEDC2Q9H467 287 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 ALG2Q9H553 416 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 TRPC7Q9HCX4 862 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 PRMT8Q9NR22 394 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-216ENST00000556066 GKN1Q9NS71 199 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 GDAP2Q9NXN4 497 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 OBP2AQ9NY56 170 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 HSPBP1Q9NZL4 362 aa7.17□□□□□ -1.26
PSEN1-216ENST00000556066 SIX4Q9UIU6 781 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms