RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ABRAQ8N0Z2 381 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 MAP3K14Q99558 947 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 P2RX7Q99572 595 aaKnown RBP5.07□□□□□ -1.6
SCFD1-217ENST00000555953 PCDH12Q9NPG4 1184 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 STAP2Q9UGK3 403 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 COL4A3BPQ9Y5P4 624 aa5.07□□□□□ -1.6
SCFD1-217ENST00000555953 CADPSQ9ULU8 1353 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 AP4M1O00189 453 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 FCHO1O14526 889 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 PRKCBP05771 671 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 CYP2C9P11712 490 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 KCNA3P22001 575 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 IL1R2P27930 398 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 PLCD1P51178 756 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 DGKEP52429 567 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 POLGP54098 1239 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-217ENST00000555953 WNT3P56703 355 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 SATB1Q01826 763 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 KRT17Q04695 432 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-217ENST00000555953 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 IZUMO1Q8IYV9 350 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 NRACQ8N912 160 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 WASF1Q92558 559 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 PRR25Q96S07 402 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 NUP88Q99567 741 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-217ENST00000555953 DPCDQ9BVM2 203 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-217ENST00000555953 TCF7L1Q9HCS4 588 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
SCFD1-217ENST00000555953 UBE2Q2LH0YL09 131 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 SOCS2O14508 198 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 THP07101 528 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 RAB1AP62820 205 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 PSG6Q00889 435 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 ZNF268Q14587 947 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-217ENST00000555953 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 CRELD2Q6UXH1 353 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-217ENST00000555953 ZNF813Q6ZN06 617 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 BCDIN3DQ7Z5W3 292 aaKnown RBP5.05□□□□□ -1.6
SCFD1-217ENST00000555953 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 COQ8BQ96D53 544 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 MMS19Q96T76 1030 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 FAM118BQ9BPY3 351 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 EFHD1Q9BUP0 239 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 CNNM1Q9NRU3 951 aa5.05□□□□□ -1.6
SCFD1-217ENST00000555953 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
SCFD1-217ENST00000555953 A0A087WWL8 130 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 MYO1CO00159 1063 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 ADAM10O14672 748 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 PF4V1P10720 104 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 LINC00205P59089 165 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 ZNF267Q14586 743 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-217ENST00000555953 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 MEX3CQ5U5Q3 659 aaKnown RBP5.04□□□□□ -1.6
SCFD1-217ENST00000555953 SHC4Q6S5L8 630 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 GAS2L3Q86XJ1 694 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 SLC15A4Q8N697 577 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 TMEM171Q8WVE6 324 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 C1GALT1C1Q96EU7 318 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 HOMER2Q9NSB8 354 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 IP6K2Q9UHH9 426 aa5.04□□□□□ -1.6
SCFD1-217ENST00000555953 A0A088AWK7 358 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 INSIG1O15503 277 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 FGBP02675 491 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 MYCLP12524 364 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-217ENST00000555953 XRCC6P12956 609 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCFD1-217ENST00000555953 NPR1P16066 1061 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 VCAM1P19320 739 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 ARFIP2P53365 341 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 PRKAG1P54619 331 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 FGL2Q14314 439 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 IRF2BP2Q7Z5L9 587 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 SAMD14Q8IZD0 417 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-217ENST00000555953 C16orf52Q8NHV5 167 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 BPIFB1Q8TDL5 484 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 C17orf80Q9BSJ5 609 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 TRIM54Q9BYV2 358 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 PIH1D1Q9NWS0 290 aaKnown RBP5.03□□□□□ -1.6
SCFD1-217ENST00000555953 TFCP2L1Q9NZI6 479 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 AMFRQ9UKV5 643 aa5.03□□□□□ -1.6
SCFD1-217ENST00000555953 TMEM232C9JQI7 657 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 DSCR3O14972 297 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 OFD1O75665 1012 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 FGAP02671 866 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 A1BGP04217 495 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 SNHG28P0DPA3 235 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 NEK2P51955 445 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 RAPGEF1Q13905 1077 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 MLC1Q15049 377 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 PTCHD3Q3KNS1 767 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 PLA1AQ53H76 456 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 IFIT1BQ5T764 474 aaKnown RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 RUSC1-AS1Q66K80 236 aa5.02□□□□□ -1.61
SCFD1-217ENST00000555953 LMBRD2Q68DH5 695 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 MRPL10Q7Z7H8 261 aaKnown RBP5.02□□□□□ -1.61
SCFD1-217ENST00000555953 SFTPA1Q8IWL2 248 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms