RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 RETP07949 1114 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 PDGFRBP09619 1106 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 PTPN1P18031 435 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 HDCP19113 662 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 KCNA4P22459 653 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 TGM1P22735 817 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 STK4Q13043 487 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 TRIM68Q6AZZ1 485 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 FSTL4Q6MZW2 842 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 KIAA0895Q8NCT3 520 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 OR6B3Q8NGW1 331 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 CCDC26Q8TAB7 109 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 TRPC7Q9HCX4 862 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 EXOC1Q9NV70 894 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 DUS2Q9NX74 493 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
HNRNPC-221ENST00000555883 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 ZNF840PA6NDX5 716 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 F8VP50 259 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 MAPK13O15264 365 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 KIF20AO95235 890 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 PFKFB1P16118 471 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 GJA4P35212 333 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 MYL6P60660 151 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 SLC7A9P82251 487 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 ENPEPQ07075 957 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 NR1H3Q13133 447 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 EML3Q32P44 896 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 MDH1BQ5I0G3 518 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 CYP2S1Q96SQ9 504 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 P2RY13Q9BPV8 354 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
HNRNPC-221ENST00000555883 LRRIQ3A6PVS8 624 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 A8MXQ7 604 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 IKBKBO14920 756 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 HRO43593 1189 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 PHACTR2O75167 634 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 AKAP3O75969 853 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 NFATC1O95644 943 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 OAS1P00973 400 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 C4BPAP04003 597 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 P4HA1P13674 534 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 ARSAP15289 507 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 IFNAR2P48551 515 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 FNTBP49356 437 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 USP46P62068 366 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 KRT85P78386 507 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 NCOA4Q13772 614 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 SIM2Q14190 667 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 NFIL3Q16649 462 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 ZNF699Q32M78 642 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 ZACNQ401N2 412 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 KMT5BQ4FZB7 885 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 DGLUCYQ7Z3D6 616 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 GRAMD1CQ8IYS0 662 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 TAF4BQ92750 862 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 TRAF3IP3Q9Y228 551 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 ATP8B3O60423 1300 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 PTPRDP23468 1912 aa13.52□□□□□ -0.25
HNRNPC-221ENST00000555883 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 NR3C1P04150 777 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 GALK1P51570 392 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 DMWDQ09019 674 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 BIRC3Q13489 604 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 SNX30Q5VWJ9 437 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 SYT13Q7L8C5 426 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 NUP93Q8N1F7 819 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 CD101Q93033 1021 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 LOXL4Q96JB6 756 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 SCAND2PQ9GZW5 306 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 DPEP3Q9H4B8 488 aa13.51□□□□□ -0.25
HNRNPC-221ENST00000555883 C2orf42Q9NWW7 574 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms