RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 A8MUI8 341 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 CHADO15335 359 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
TUBB3-209ENST00000555609 RPSAP08865 295 aaKnown RBP16.92■□□□□ 0.3
TUBB3-209ENST00000555609 DHRS4L1P0CG22 281 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 IL1R2P27930 398 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 SSTR1P30872 391 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 ZNF394Q53GI3 561 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 HP1BP3Q5SSJ5 553 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-209ENST00000555609 ANKRD22Q5VYY1 191 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 PLPPR4Q7Z2D5 763 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 RFX6Q8HWS3 928 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 TTC39CQ8N584 583 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 TEX9Q8N6V9 391 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 SPOCK2Q92563 424 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
TUBB3-209ENST00000555609 VRTNQ9H8Y1 702 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 HAO1Q9UJM8 370 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 PPP2R3BQ9Y5P8 575 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
TUBB3-209ENST00000555609 CFAP69A5D8W1 941 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 GOLGA8SH3BPF8 625 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 LGR5O75473 907 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 EGFRP00533 1210 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 GSTA2P09210 222 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 CD19P15391 556 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 GNAZP19086 355 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 TARSP26639 723 aaKnown RBP16.91■□□□□ 0.3
TUBB3-209ENST00000555609 MSS51Q4VC12 460 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
TUBB3-209ENST00000555609 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-209ENST00000555609 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 TRIM42Q8IWZ5 723 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 JOSD2Q8TAC2 188 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 TCP10LQ8TDR4 215 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 THOC1Q96FV9 657 aaKnown RBP16.91■□□□□ 0.3
TUBB3-209ENST00000555609 TBC1D10AQ9BXI6 508 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 FZD8Q9H461 694 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 SYNCQ9H7C4 482 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 POLIQ9UNA4 740 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 AFG3L2Q9Y4W6 797 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 LRRC42Q9Y546 428 aa16.91■□□□□ 0.3
TUBB3-209ENST00000555609 GOLGA8MH3BSY2 632 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KLF11O14901 512 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 HMGCRP04035 888 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 P4HA1P13674 534 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 TCF7P36402 384 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 RAD23BP54727 409 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 GDF10P55107 478 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ZNF200P98182 395 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ROR1Q01973 937 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ATF7IP2Q5U623 682 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 FAM91A1Q658Y4 838 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 CAPN12Q6ZSI9 719 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 LONP2Q86WA8 852 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 FAM13CQ8NE31 585 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ACSF2Q96CM8 615 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 APOPT1Q96IL0 206 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 USP18Q9UMW8 372 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 LCTP09848 1927 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 CCDC22O60826 627 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 RBP3P10745 1247 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ADRA1DP25100 572 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 MARK3P27448 753 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 MIPP30301 263 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 GMPSP49915 693 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 SLC26A2P50443 739 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 NEK3P51956 506 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ZNF143P52747 638 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 DYNLT1P63172 113 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KRT72Q14CN4 511 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 NAA25Q14CX7 972 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 NOMO1Q15155 1222 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KYAT1Q16773 422 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ANKRD20A2Q5SQ80 823 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 LGSNQ5TDP6 509 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ANKRD20A1Q5TYW2 823 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ANKRD20A3Q5VUR7 823 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 LBX2Q6XYB7 198 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 CLNKQ7Z7G1 428 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KIAA0319LQ8IZA0 1049 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 RNF149Q8NC42 400 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 USP6NLQ92738 828 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 KLRG1Q96E93 195 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 RPF1Q9H9Y2 349 aaKnown RBP16.9■□□□□ 0.3
TUBB3-209ENST00000555609 PAK5Q9P286 719 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 ZNF180Q9UJW8 692 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 TNFSF13BQ9Y275 285 aa16.9■□□□□ 0.3
TUBB3-209ENST00000555609 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
TUBB3-209ENST00000555609 LPXNO60711 386 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms