RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 DZANK1Q9NVP4 752 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 THEGQ9P2T0 379 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
PSEN1-213ENST00000555386 RAB21Q9UL25 225 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 CDH9Q9ULB4 789 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 GUCA1BQ9UMX6 200 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 COG5Q9UP83 839 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 COQ4Q9Y3A0 265 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 PTPRDP23468 1912 aa10.47□□□□□ -0.73
PSEN1-213ENST00000555386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 SSU72P8A0A1W2PR75 194 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 P4HA2O15460 535 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 ABLIM3O94929 683 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 VNN2O95498 520 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CALCAP01258 141 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 LRG1P02750 347 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PNMA6AP0CW24 399 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 KRT5P13647 590 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 ATF2P15336 505 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PTPN1P18031 435 aaKnown RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CYP2F1P24903 491 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 USP8P40818 1118 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 GPR15P49685 360 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 KLK7P49862 253 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 TWF1Q12792 350 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 KIF5AQ12840 1032 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 GPR17Q13304 367 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PHLDB3Q6NSJ2 640 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CES5AQ6NT32 575 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CC2D1AQ6P1N0 951 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 LIMS2Q7Z4I7 341 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 SCN4BQ8IWT1 228 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 C12orf29Q8N999 325 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 B3GALNT2Q8NCR0 500 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 NEK11Q8NG66 645 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 LMO3Q8TAP4 145 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 GIPC2Q8TF65 315 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 SMG7Q92540 1137 aaKnown RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 MYLPFQ96A32 169 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 HEXIM2Q96MH2 286 aaKnown RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 TWNKQ96RR1 684 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.74
PSEN1-213ENST00000555386 BCO2Q9BYV7 579 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 ELOVL4Q9GZR5 314 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PLEKHA4Q9H4M7 779 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 SFXN1Q9H9B4 322 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CYP3A43Q9HB55 503 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 CEP72Q9P209 647 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PCDHB5Q9Y5E4 795 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 PCDHB4Q9Y5E5 795 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 INSL5Q9Y5Q6 135 aa10.46□□□□□ -0.74
PSEN1-213ENST00000555386 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 ERLIN1O75477 346 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 ZMYND10O75800 440 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 CCDC130P13994 396 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 BDNFP23560 247 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 PON1P27169 355 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 ADORA2BP29275 332 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-213ENST00000555386 NTHL1P78549 312 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 CKAP4Q07065 602 aaKnown RBP10.45□□□□□ -0.74
PSEN1-213ENST00000555386 DMTNQ08495 405 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 DDR2Q16832 855 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 TPGS2Q68CL5 300 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 PTCRAQ6ISU1 281 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-213ENST00000555386 TMEM270Q6UE05 265 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 TMEM184AQ6ZMB5 413 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 TRIM58Q8NG06 486 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 BAP1Q92560 729 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 MSLNLQ96KJ4 702 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 HCFC1R1Q9NWW0 138 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 DPP7Q9UHL4 492 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-213ENST00000555386 YIPF1Q9Y548 306 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 SAR1BQ9Y6B6 198 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 MYO10Q9HD67 2058 aa10.45□□□□□ -0.74
PSEN1-213ENST00000555386 PMM2O15305 246 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 PJA2O43164 708 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 CILPO75339 1184 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ABL1P00519 1130 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 IL9P15248 144 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 CD19P15391 556 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 PRLRP16471 622 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 HOXB8P17481 243 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 TBXAS1P24557 533 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 MCM3P25205 808 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ALDH1A3P47895 512 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 IFRD2Q12894 506 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 COL19A1Q14993 1142 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 TAF12Q16514 161 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 NFE2Q16621 373 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 C4orf50Q6ZRC1 276 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 GRASPQ7Z6J2 395 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms