RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 USP4Q13107 963 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 PSMD6Q15008 389 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 MAPRE1Q15691 268 aaKnown RBP22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 WDR72Q3MJ13 1102 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 CNNM4Q6P4Q7 775 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 DENND5BQ6ZUT9 1274 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 UNC13DQ70J99 1090 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 KBTBD6Q86V97 674 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 RPLP0P6Q8NHW5 317 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 GAB3Q8WWW8 586 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 EZH1Q92800 747 aaPredicted RBP22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 CD101Q93033 1021 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 ATP2A3Q93084 1043 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 CGRRF1Q99675 332 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 DPEP3Q9H4B8 488 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 TRPM5Q9NZQ8 1165 aa22.43■■□□□ 1.18
NSFL1C-211ENST00000555359 F8VP50 259 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 MYL6P60660 151 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 CACNA2D4Q7Z3S7 1137 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 GRAMD1CQ8IYS0 662 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 NETO1Q8TDF5 533 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 NXF1Q9UBU9 619 aaKnown RBP22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 ARHGAP26Q9UNA1 814 aa22.42■■□□□ 1.18
NSFL1C-211ENST00000555359 SLC30A4O14863 429 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 PTPN1P18031 435 aaKnown RBP22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 ME1P48163 572 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 CASP4P49662 377 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 CACNA2D1P54289 1103 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 TNNC1P63316 161 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 IFRD2Q12894 506 aaPredicted RBP22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 NR1H3Q13133 447 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 TRPC3Q13507 836 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 CUL4BQ13620 913 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 SF3A2Q15428 464 aaKnown RBP22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 EXOC4Q96A65 974 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 ELMO3Q96BJ8 720 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 RNF38Q9H0F5 515 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 GZF1Q9H116 711 aaPredicted RBP22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 PCDHA7Q9UN72 937 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 ANAPC1Q9H1A4 1944 aa22.41■■□□□ 1.18
NSFL1C-211ENST00000555359 ZNF840PA6NDX5 716 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 ANTXRLA6NF34 631 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 LEFTY2O00292 366 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 CLDN5O00501 218 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 SCAMP3O14828 347 aaKnown RBP22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 TRIM66O15016 1216 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 PHACTR2O75167 634 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 TACC1O75410 805 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 EHHADHQ08426 723 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 FBXO43Q4G163 708 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 CAMKK1Q8N5S9 505 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 B3GNT5Q9BYG0 378 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 ZNF518BQ9C0D4 1074 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 TMEM30AQ9NV96 361 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 SMPD4Q9NXE4 827 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 FAM13BQ9NYF5 915 aa22.4■■□□□ 1.18
NSFL1C-211ENST00000555359 GREB1Q4ZG55 1949 aa22.39■■□□□ 1.18
NSFL1C-211ENST00000555359 CCDC163A0A0D9SF12 145 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 A8MXQ7 604 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 EXOC3O60645 756 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 ZSCAN22P10073 491 aaPredicted RBP22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 CDH8P55286 799 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 SEC13P55735 322 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 SNRPFP62306 86 aaKnown RBP22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 TAF10Q12962 218 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 PLEKHO2Q8TD55 490 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 C8orf48Q96LL4 319 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 SMOC1Q9H4F8 434 aa22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 TPRP12270 2363 aaKnown RBP22.39■■□□□ 1.17
NSFL1C-211ENST00000555359 UBE4BO95155 1302 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 DCLK1O15075 740 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 CLSTN1O94985 981 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 F13A1P00488 732 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 FAM163BP0C2L3 166 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 KCNA4P22459 653 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 RAP1GAPP47736 663 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 PDE6CP51160 858 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 DMC1Q14565 340 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 KNOP1Q1ED39 458 aaKnown RBP22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 AASDHQ4L235 1098 aaPredicted RBP22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 PPM1JQ5JR12 505 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 TDRD10Q5VZ19 366 aaKnown RBP22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 FILIP1Q7Z7B0 1213 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 SNX21Q969T3 373 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 CNTNAP3BQ96NU0 1288 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 TTLL2Q9BWV7 592 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 CNTNAP3Q9BZ76 1288 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 MAGEF1Q9HAY2 307 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 RXFP3Q9NSD7 469 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 SERTAD1Q9UHV2 236 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 INVSQ9Y283 1065 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 CPQQ9Y646 472 aa22.38■■□□□ 1.17
NSFL1C-211ENST00000555359 PVALEFA0A1B0GWK0 134 aa22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 NFATC1O95644 943 aa22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 HSP90AA1P07900 732 aaKnown RBP22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 TCF3P15923 654 aa22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 NOP14P78316 857 aaKnown RBP22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 BIRC3Q13489 604 aa22.37■■□□□ 1.17
NSFL1C-211ENST00000555359 C2orf27AQ580R0 203 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms