RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SCINQ9Y6U3 715 aa24.89■■□□□ 1.58
STRN3-207ENST00000555358 HGSO14964 777 aaPredicted RBP24.89■■□□□ 1.57
STRN3-207ENST00000555358 TOMM70O94826 608 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 AKR1A1P14550 325 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 GNA15P30679 374 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 ZNF200P98182 395 aaPredicted RBP24.89■■□□□ 1.57
STRN3-207ENST00000555358 PRKCZQ05513 592 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 TRIM32Q13049 653 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 NR1H3Q13133 447 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 CUL2Q13617 745 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 FSCN1Q16658 493 aaKnown RBP24.89■■□□□ 1.57
STRN3-207ENST00000555358 ATP13A4Q4VNC1 1196 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 Q9Y3F1 56 aa24.89■■□□□ 1.57
STRN3-207ENST00000555358 HTTP42858 3142 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 HAS3O00219 553 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 PRPF4O43172 522 aaKnown RBP eCLIP24.88■■□□□ 1.57
STRN3-207ENST00000555358 SPAG7O75391 227 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 CST3P01034 146 aaPredicted RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 LMNB2Q03252 620 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 NOGQ13253 232 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 WDR49Q8IV35 697 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 RSRC1Q96IZ7 334 aaKnown RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 CDHR5Q9HBB8 845 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 BRCA2P51587 3418 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 ALDH1A1P00352 501 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 ZSCAN5DPP0CG00 497 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 CXCL8P10145 99 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 KRT10P13645 584 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 TCF4P15884 667 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 SSR1P43307 286 aaKnown RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 C1QBPQ07021 282 aaKnown RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 DRICH1Q6PGQ1 229 aaPredicted RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 TMEM270Q6UE05 265 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 FEZF2Q8TBJ5 459 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 THOC1Q96FV9 657 aaKnown RBP24.88■■□□□ 1.57
STRN3-207ENST00000555358 PCDHB4Q9Y5E5 795 aa24.88■■□□□ 1.57
STRN3-207ENST00000555358 PI4K2BG5E9Z4 385 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 TSPAN1O60635 241 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 CYBAP13498 195 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 SLC18A1P54219 525 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 CRYMQ14894 314 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 FASTKD3Q14CZ7 662 aaKnown RBP24.87■■□□□ 1.57
STRN3-207ENST00000555358 RGS9BPQ6ZS82 235 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 MAB21L3Q8N8X9 362 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 SPOCK2Q92563 424 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 UTP4Q969X6 686 aaKnown RBP24.87■■□□□ 1.57
STRN3-207ENST00000555358 CAPNS2Q96L46 248 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 SLITRK1Q96PX8 696 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 PAIP2Q9BPZ3 127 aaKnown RBP24.87■■□□□ 1.57
STRN3-207ENST00000555358 MYLK2Q9H1R3 596 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 ADAMTS10Q9H324 1103 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 GRID1Q9ULK0 1009 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 CNTN6Q9UQ52 1028 aa24.87■■□□□ 1.57
STRN3-207ENST00000555358 MBLAC1A4D2B0 266 aaPredicted RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 C6orf222P0C671 652 aaPredicted RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 CYP2C9P11712 490 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 ADAM17P78536 824 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 DNAJC3Q13217 504 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 NCOA4Q13772 614 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 TMEM130Q8N3G9 435 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 ALLCQ8N6M5 410 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 TTC25Q96NG3 672 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 KIF9Q9HAQ2 790 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 SUFUQ9UMX1 484 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 NUB1Q9Y5A7 615 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 TREHO43280 583 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 ETS1P14921 441 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 PECAM1P16284 738 aaPredicted RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 YARSP54577 528 aaKnown RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 SLC8A3P57103 927 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 RPL7AP62424 266 aaKnown RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 TFAMQ00059 246 aaKnown RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 PURAQ00577 322 aaKnown RBP24.86■■□□□ 1.57
STRN3-207ENST00000555358 ZNF410Q86VK4 478 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 ERICH1Q86X53 443 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 RCOR2Q8IZ40 523 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 FBF1Q8TES7 1133 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 TRABDQ9H4I3 376 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 PARVAQ9NVD7 372 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 PHTF1Q9UMS5 762 aa24.86■■□□□ 1.57
STRN3-207ENST00000555358 KIF1CO43896 1103 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 GPR32O75388 356 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 STAG3L1P0CL83 205 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 NOP14P78316 857 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 PKN2Q16513 984 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 KAZNQ674X7 775 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 MFSD7Q6UXD7 560 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 RBBP8NLQ8NC74 664 aaPredicted RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 RBM41Q96IZ5 413 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 ETNK1Q9HBU6 452 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 IP6K2Q9UHH9 426 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 CHKBQ9Y259 395 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 DUSP11O75319 330 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 ARSEP51690 589 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 ZNF252P-AS1Q0IIN9 211 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 DEFB115Q30KQ5 88 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 DNAJB3Q8WWF6 145 aa24.85■■□□□ 1.57
STRN3-207ENST00000555358 RPF1Q9H9Y2 349 aaKnown RBP24.85■■□□□ 1.57
STRN3-207ENST00000555358 TXLNGQ9NUQ3 528 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms