RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
SHOX-204ENST00000554971 TAS1R2Q8TE23 839 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 FAM107BQ9H098 131 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 THAP2Q9H0W7 228 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 TMEM8AQ9HCN3 771 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 OSGEPQ9NPF4 335 aa18.36■□□□□ 0.53
SHOX-204ENST00000554971 ESYT3A0FGR9 886 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 GOLGA6L10A6NI86 522 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 CSPG5O95196 566 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 FTLP02792 175 aaPredicted RBP18.35■□□□□ 0.53
SHOX-204ENST00000554971 IRS1P35568 1242 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 AP3M2P53677 418 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 DHX34Q14147 1143 aaKnown RBP18.35■□□□□ 0.53
SHOX-204ENST00000554971 ADGRE1Q14246 886 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 HLTFQ14527 1009 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHOX-204ENST00000554971 PIK3R5Q8WYR1 880 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 RUNDC3BQ96NL0 473 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHOX-204ENST00000554971 CARNS1A5YM72 827 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
SHOX-204ENST00000554971 ABCB4P21439 1286 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 ECHS1P30084 290 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 MYL6P60660 151 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 BIRC3Q13489 604 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 NCOA4Q13772 614 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 TTMPQ5BVD1 217 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 RTP2Q5QGT7 225 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 VPS52Q8N1B4 723 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 SHC3Q92529 594 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 ZBP1Q9H171 429 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 GOLPH3Q9H4A6 298 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
SHOX-204ENST00000554971 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
SHOX-204ENST00000554971 FGGP02679 453 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 SOD2P04179 222 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 RBP5P82980 135 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 KRT17Q04695 432 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 ARHGEF19Q8IW93 802 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 ARFGAP2Q8N6H7 521 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 AUTS2Q8WXX7 1259 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 ARL8AQ96BM9 186 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 SUSD3Q96L08 255 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 DDX47Q9H0S4 455 aaKnown RBP18.34■□□□□ 0.53
SHOX-204ENST00000554971 NUB1Q9Y5A7 615 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 ALG6Q9Y672 507 aa18.34■□□□□ 0.53
SHOX-204ENST00000554971 M0QZQ0 153 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 EIF3HO15372 352 aaKnown RBP eCLIP18.33■□□□□ 0.53
SHOX-204ENST00000554971 HLA-DRAP01903 254 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 TKTP29401 623 aaKnown RBP18.33■□□□□ 0.53
SHOX-204ENST00000554971 TAF6P49848 677 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 UBE3AQ05086 875 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 FAM171A1Q5VUB5 890 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 ARHGEF26Q96DR7 871 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 HPDLQ96IR7 371 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 ATP6V1G3Q96LB4 118 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 GUCD1Q96NT3 240 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 TLR9Q9NR96 1032 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 CTTNBP2NLQ9P2B4 639 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 UVRAGQ9P2Y5 699 aa18.33■□□□□ 0.53
SHOX-204ENST00000554971 NOCTQ9UK39 431 aaKnown RBP18.33■□□□□ 0.53
SHOX-204ENST00000554971 KPNA7A9QM74 516 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 FGFR3P22607 806 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 DNAJC21Q5F1R6 531 aaKnown RBP18.33■□□□□ 0.52
SHOX-204ENST00000554971 DEFB123Q8N688 67 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 NT5C1BQ96P26 610 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 PI4K2AQ9BTU6 479 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHOX-204ENST00000554971 TAS2R14Q9NYV8 317 aa18.33■□□□□ 0.52
SHOX-204ENST00000554971 HIDE1A8MVS5 230 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 FSCN2O14926 492 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 LILRB3O75022 631 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 ASS1P00966 412 aaKnown RBP18.32■□□□□ 0.52
SHOX-204ENST00000554971 KIAA0319Q5VV43 1072 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 SMYD5Q6GMV2 418 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 SPOPLQ6IQ16 392 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 SRLQ86TD4 932 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 EPS8L1Q8TE68 723 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 SENP8Q96LD8 212 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 ZNF560Q96MR9 790 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 HERC2P3Q9BVR0 1158 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 FAM129AQ9BZQ8 928 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 AMACRQ9UHK6 382 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 COG5Q9UP83 839 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 TIMM13Q9Y5L4 95 aaPredicted RBP18.32■□□□□ 0.52
SHOX-204ENST00000554971 MUC3AQ02505 3323 aa18.32■□□□□ 0.52
SHOX-204ENST00000554971 CYP1A2P05177 515 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 CTSAP10619 480 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 CHRNA3P32297 505 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 HSD17B3P37058 310 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms