RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	GRM1	Q13255	1194 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	TP53BP2	Q13625	1128 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	PABPC1L	Q4VXU2	614 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	LY6G5C	Q5SRR4	150 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	PPP4R3A	Q6IN85	833 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	USP50	Q70EL3	339 aa	Predicted RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	NOL8	Q76FK4	1167 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	FITM2	Q8N6M3	262 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	CAPNS2	Q96L46	248 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	ISCA1	Q9BUE6	129 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	GTPBP4	Q9BZE4	634 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	REXO4	Q9GZR2	422 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	HSFX1	Q9UBD0	423 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	POLL	Q9UGP5	575 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	PGAP2	Q9UHJ9	254 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	SLC45A2	Q9UMX9	530 aa		6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	LAS1L	Q9Y4W2	734 aa	Known RBP	6.37	□□□□□ -1.39
PSMC6-208	ENST00000554956	SH3TC1	Q8TE82	1336 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	ABLIM3	O94929	683 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	SPDEF	O95238	335 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	FCER1A	P12319	257 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	SNAPC2	Q13487	334 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	GRAP	Q13588	217 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	PTPA	Q15257	358 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	RALBP1	Q15311	655 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	ATP2B3	Q16720	1220 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	TTC7B	Q86TV6	843 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	GRAPL	Q8TC17	118 aa	Predicted RBP	6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	RNF31	Q96EP0	1072 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	TLR10	Q9BXR5	811 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	WDR11	Q9BZH6	1224 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	PNN	Q9H307	717 aa	Known RBP	6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	RNPEP	Q9H4A4	650 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	ADARB2	Q9NS39	739 aa	Known RBP	6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	BABAM1	Q9NWV8	329 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	CALCOCO1	Q9P1Z2	691 aa		6.36	□□□□□ -1.39
PSMC6-208	ENST00000554956	RTL9	Q8NET4	1388 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	ASTN2	O75129	1339 aa	Predicted RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	SCN4A	P35499	1836 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	E2F8	A0AVK6	867 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PSMD14	O00487	310 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	AGFG2	O95081	481 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	CELF2	O95319	508 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	POU2F2	P09086	479 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	ZNF853	P0CG23	659 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	MTHFD1	P11586	935 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	CKB	P12277	381 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	MAL	P21145	153 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	BMPR1A	P36894	532 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	HMGA2	P52926	109 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	GPSM2	P81274	684 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PIN1	Q13526	163 aa	Predicted RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	SF3B3	Q15393	1217 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	UTP14C	Q5TAP6	766 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	USP45	Q70EL2	814 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	RAVER1	Q8IY67	606 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	ULK2	Q8IYT8	1036 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	TMEM132C	Q8N3T6	1108 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PRR18	Q8N4B5	295 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	AMER2	Q8N7J2	671 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PLBD2	Q8NHP8	589 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	ASB10	Q8WXI3	467 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	RUNDC1	Q96C34	613 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	ABHD8	Q96I13	439 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PACSIN1	Q9BY11	444 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	RHOBTB2	Q9BYZ6	727 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	VPS33B	Q9H267	617 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	SERHL2	Q9H4I8	314 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	DBNDD1	Q9H9R9	158 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	CNOT7	Q9UIV1	285 aa	Known RBP	6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	PCDHA3	Q9Y5H8	950 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	DUOX1	Q9NRD9	1551 aa		6.35	□□□□□ -1.39
PSMC6-208	ENST00000554956	LAMB4	A4D0S4	1761 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	GRID2IP	A4D2P6	1211 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	NT5C1B-RDH14	C9J2C7	533 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	F2RL2	O00254	374 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	AKAP10	O43572	662 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	ZFPL1	O95159	310 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	GPANK1	O95872	356 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	HLA-DOA	P06340	250 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	ZEB1	P37275	1124 aa	Predicted RBP	6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	RAB27A	P51159	221 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	CXADR	P78310	365 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	GUCY1B3	Q02153	619 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	MAP2K1	Q02750	393 aa	Predicted RBP	6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	LMOD3	Q0VAK6	560 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	CCDC184	Q52MB2	194 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	HSP90AB3P	Q58FF7	597 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	SLC4A10	Q6U841	1118 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	ARHGEF19	Q8IW93	802 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	C8orf58	Q8NAV2	365 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	NUP133	Q8WUM0	1156 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	RGMA	Q96B86	450 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	TTPAL	Q9BTX7	342 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	ALOXE3	Q9BYJ1	711 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	IKZF4	Q9H2S9	585 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	TCF7L1	Q9HCS4	588 aa		6.34	□□□□□ -1.39
PSMC6-208	ENST00000554956	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.34	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms