RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CPA2P48052 419 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 OAZ1P54368 228 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 GSCP56915 257 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 WDR4P57081 412 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 MRPS9P82933 396 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 DYNC1I2Q13409 638 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 THOC5Q13769 683 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 PRPSAP1Q14558 356 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 TBCCQ15814 346 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 ARL13BQ3SXY8 428 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 EFHC2Q5JST6 749 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 IRGCQ6NXR0 463 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 TMEM154Q6P9G4 183 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 ACAD11Q709F0 780 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 CLNKQ7Z7G1 428 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SETD3Q86TU7 594 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 ECHDC2Q86YB7 292 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SIAH1Q8IUQ4 282 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 CCDC60Q8IWA6 550 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 BEST2Q8NFU1 509 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 RXFP2Q8WXD0 754 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 ACSF2Q96CM8 615 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 HPDLQ96IR7 371 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 BTBD10Q9BSF8 475 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 PORCNQ9H237 461 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 PAPOLBQ9NRJ5 636 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 COX16Q9P0S2 106 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SEPT10Q9P0V9 454 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 ARHGAP10A1A4S6 786 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 ACKR2O00590 384 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 WNT10BO00744 389 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 PLSCR1O15162 318 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 MTSS1O43312 755 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 HUS1O60921 280 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 NOL3O60936 208 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 GJB6O95452 261 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SETSIPP0DME0 302 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 TXNP10599 105 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 HSPA8P11142 646 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 ECHS1P30084 290 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 MIPP30301 263 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SOX10P56693 466 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 TAS2R40P59535 323 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 COG7P83436 770 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 CUL3Q13618 768 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 CYP4A22Q5TCH4 519 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 TTC39BQ5VTQ0 682 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 POTEAQ6S8J7 498 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 SH3BP5LQ7L8J4 393 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 CDR2LQ86X02 465 aaPredicted RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 FAM13CQ8NE31 585 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 LMO3Q8TAP4 145 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 PWWP2AQ96N64 755 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 LRMDAQ9H2I8 198 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 MRPL40Q9NQ50 206 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 G3BP2Q9UN86 482 aaKnown RBP4.06□□□□□ -1.76
KTN1-217ENST00000554831 MAGEA13PA6NCF6 341 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 VWA5AO00534 786 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 TRDMT1O14717 391 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 ENTPD5O75356 428 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 GRAP2O75791 330 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 ASMTLO95671 621 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 UNGP13051 313 aaPredicted RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 CHRNB2P17787 502 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 RPS12P25398 132 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 CNTFP26441 200 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 ERFP50548 548 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 NLRP11P59045 1033 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 SLC34A1Q06495 639 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 ACVR2BQ13705 512 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 CHI3L2Q15782 390 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 SHROOM1Q2M3G4 852 aaPredicted RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 DALRD3Q5D0E6 543 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 APOBEC3FQ8IUX4 373 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 KIF12Q96FN5 646 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 SRPK1Q96SB4 655 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 MMADHCQ9H3L0 296 aaPredicted RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 ARHGEF3Q9NR81 526 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 SMYD2Q9NRG4 433 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 PCMTD2Q9NV79 361 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 SLC5A4Q9NY91 659 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 PNMA3Q9UL41 463 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 KBTBD13C9JR72 458 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 AP3B1O00203 1094 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 PRPF4O43172 522 aaKnown RBP eCLIP4.05□□□□□ -1.76
KTN1-217ENST00000554831 GLRA3O75311 464 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 ATP5BP06576 529 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 POLBP06746 335 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 PYGBP11216 843 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 ALADP13716 330 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 RGS7P49802 495 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 COPAP53621 1224 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 STX1BP61266 288 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 TMEM132DQ14C87 1099 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 PDK1Q15118 436 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 LRRC23Q53EV4 343 aaPredicted RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 RARS2Q5T160 578 aaKnown RBP4.05□□□□□ -1.76
KTN1-217ENST00000554831 FAXCQ5TGI0 409 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 DAB2IPQ5VWQ8 1189 aa4.05□□□□□ -1.76
KTN1-217ENST00000554831 MPZL3Q6UWV2 235 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms