RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MBD3L4A6NDZ8 208 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 MBD3L3A6NE82 208 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 VWC2LB2RUY7 222 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ADM5C9JUS6 153 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 CREB3O43889 395 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 PIP5K1CO60331 668 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 TBC1D4O60343 1298 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 IL18RAPO95256 599 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 CYP2C9P11712 490 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 IL1R1P14778 569 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 CD6P30203 668 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 PPIFP30405 207 aaKnown RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 PPM1AP35813 382 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 IL6STP40189 918 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 PXNP49023 591 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 MAPK10P53779 464 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 CACNA2D1P54289 1103 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 NXPH1P58417 271 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 DAG1Q14118 895 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 TXNRD1Q16881 649 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ZIK1Q3SY52 487 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF362Q5T0B9 420 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 DCAF12L1Q5VU92 463 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 RRAGBQ5VZM2 374 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 KAZNQ674X7 775 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 DPP9Q86TI2 863 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ADGRG3Q86Y34 549 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 RNF152Q8N8N0 203 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 B3GALNT2Q8NCR0 500 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 TOR1AIP2Q8NFQ8 470 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 TFAP2BQ92481 460 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 MOGAT1Q96PD6 335 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 BBC3Q96PG8 261 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 DUSP26Q9BV47 211 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 AMBRA1Q9C0C7 1298 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 R3HDMLQ9H3Y0 253 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 STARD7Q9NQZ5 370 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 TRMT13Q9NUP7 481 aaKnown RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 RGS17Q9UGC6 210 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-213ENST00000554776 SHOC2Q9UQ13 582 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 SSX2IPQ9Y2D8 614 aa3.76□□□□□ -1.81
SCFD1-213ENST00000554776 ADGRA2Q96PE1 1338 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 MYO1CO00159 1063 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 APOL1O14791 398 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 PPFIA2O75334 1257 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 RHOP08100 348 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 RPL17P18621 184 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 KLRC1P26715 233 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 GRIA3P42263 894 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 HALP42357 657 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 HTRA4P83105 476 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ZRSR2Q15696 482 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ARL13BQ3SXY8 428 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 SLC44A4Q53GD3 710 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 INO80DQ53TQ3 878 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 IZUMO3Q5VZ72 239 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 UNC13DQ70J99 1090 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 PEG10Q86TG7 708 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF280BQ86YH2 543 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 FAM136AQ96C01 138 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 EVI5LQ96CN4 794 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 SNX22Q96L94 193 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 PTDSS2Q9BVG9 487 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 STK31Q9BXU1 1019 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ACTRT3Q9BYD9 372 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 TPSD1Q9BZJ3 242 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 UNKQ9C0B0 810 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 WDR12Q9GZL7 423 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 MS4A7Q9GZW8 240 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ARFGAP3Q9NP61 516 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 A1CFQ9NQ94 594 aaKnown RBP3.75□□□□□ -1.81
SCFD1-213ENST00000554776 SERHLQ9NQF3 203 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 KLC4Q9NSK0 619 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 TBC1D23Q9NUY8 699 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 ITGB1BP2Q9UKP3 347 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 LRCH1Q9Y2L9 728 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 COX11Q9Y6N1 276 aa3.75□□□□□ -1.81
SCFD1-213ENST00000554776 hCG_1984214I3L0E3 225 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PYCARD-AS1I3L0S3 204 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ORC4O43929 436 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 FGF18O76093 207 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CSF1RP07333 972 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CHRM2P08172 466 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PDHA1P08559 390 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ELFN1P0C7U0 828 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 XRCC6P12956 609 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PCSK6P29122 969 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 LRPAP1P30533 357 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CHKAP35790 457 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 HSPA7P48741 367 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PTH2RP49190 550 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 MYO1EQ12965 1108 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ELF2Q15723 593 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PLA1AQ53H76 456 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ARHGAP40Q5TG30 622 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ICE2Q659A1 982 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 SFRP4Q6FHJ7 346 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 RGS7BPQ6MZT1 257 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 FBXO42Q6P3S6 717 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms