RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 ARHGAP17Q68EM7 881 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 MON1AQ86VX9 555 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 ARID3BQ8IVW6 561 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 GCNAQ96QF7 691 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 KXD1Q9BQD3 176 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 SLITRK6Q9H5Y7 841 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 ZFP14Q9HCL3 533 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 KRT82Q9NSB4 513 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 GCNT4Q9P109 453 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 KIAA1257Q9ULG3 409 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 DUSP12Q9UNI6 340 aa13.69□□□□□ -0.22
MTHFD1-209ENST00000554768 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 FAM200BP0CF97 657 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 SRFP11831 508 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 PON1P27169 355 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 MAP3K7CLP57077 242 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 GPC5P78333 572 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 MYL5Q02045 173 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 APBA1Q02410 837 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 NCAPHQ15003 741 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 ANO6Q4KMQ2 910 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 DPY19L2P1Q6NXN4 242 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 TRIM65Q6PJ69 517 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 TMEM270Q6UE05 265 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 CLEC20AQ6ZU45 233 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 SCAMP5Q8TAC9 235 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 MRPS31Q92665 395 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 JAKMIP2Q96AA8 810 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 RSPRY1Q96DX4 576 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 ASIC4Q96FT7 647 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 ZMYM5Q9UJ78 669 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 PCDHB4Q9Y5E5 795 aa13.68□□□□□ -0.22
MTHFD1-209ENST00000554768 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 FAM92AA1XBS5 289 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 ZNF840PA6NDX5 716 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 HHLA1C9JL84 531 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 PAEPP09466 180 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 NPR3P17342 541 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 YWHAQP27348 245 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 ZNF132P52740 706 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 TAF10Q12962 218 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 CMTM8Q8IZV2 173 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 ANKRD52Q8NB46 1076 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 BPIFA3Q9BQP9 254 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 FUCA2Q9BTY2 467 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 HSD3B7Q9H2F3 369 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 SIX2Q9NPC8 291 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 TRPM5Q9NZQ8 1165 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 APEX2Q9UBZ4 518 aa13.67□□□□□ -0.22
MTHFD1-209ENST00000554768 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 HEPACAM2A8MVW5 462 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 M0R296 226 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 PRAMEF12O95522 483 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 VDRP11473 427 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 ZNF18P17022 549 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 PPP3CCP48454 512 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 SLC5A3P53794 718 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 KRT31Q15323 416 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 SGO2Q562F6 1265 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 VITQ6UXI7 678 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 ENOSF1Q7L5Y1 443 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 MFSD6LQ8IWD5 586 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 TFAP2BQ92481 460 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 SLC22A12Q96S37 553 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 CYP2S1Q96SQ9 504 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 SMG9Q9H0W8 520 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 PNPLA8Q9NP80 782 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 WNT16Q9UBV4 365 aa13.66□□□□□ -0.22
MTHFD1-209ENST00000554768 LIMA1Q9UHB6 759 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms