RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 GOLGA6L22H0YM25 854 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CETN3O15182 167 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 STX10O60499 249 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 TADA3O75528 432 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 RTN3O95197 1032 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-213ENST00000554508 HLA-DRAP01903 254 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 PIK3CAP42336 1068 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CDH8P55286 799 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 AMPD2Q01433 879 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 LRRC32Q14392 662 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 ITPRIPL2Q3MIP1 535 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 ZCWPW2Q504Y3 356 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 DGKKQ5KSL6 1271 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CC2D1AQ6P1N0 951 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CLEC17AQ6ZS10 378 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 MAML2Q8IZL2 1156 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-213ENST00000554508 NUP93Q8N1F7 819 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CRYBG2Q8N1P7 616 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CCDC150Q8NCX0 1101 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 STKLD1Q8NE28 680 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 SPATA20Q8TB22 786 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 SMARCE1Q969G3 411 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 TSG101Q99816 390 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 SMG9Q9H0W8 520 aaKnown RBP9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CHRDQ9H2X0 955 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 DPEP3Q9H4B8 488 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 SMYD3Q9H7B4 428 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CYP3A43Q9HB55 503 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 TMEM8AQ9HCN3 771 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 TRPC7Q9HCX4 862 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 COMMD8Q9NX08 183 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 CCL26Q9Y258 94 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 MYOFQ9NZM1 2061 aa9.28□□□□□ -0.92
ACTN1-213ENST00000554508 SPECC1L-ADORA2AF8WAN1 911 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CLDN5O00501 218 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CKMP06732 381 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 EPB41P11171 864 aaKnown RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CHRNB1P11230 501 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 TCF3P15923 654 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 HDCP19113 662 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 YWHAQP27348 245 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CTHP32929 405 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PPP1R2P41236 205 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PRCPP42785 496 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 RAP1GAPP47736 663 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 GCLMP48507 274 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 USP46P62068 366 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 UBE2HP62256 183 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CSTF1Q05048 431 aaKnown RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PPP3CAQ08209 521 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 STIM1Q13586 685 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 RUNX3Q13761 415 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PPP2R5DQ14738 602 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PDGFRLQ15198 375 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 KRT39Q6A163 491 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SCARA5Q6ZMJ2 495 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SMYD4Q8IYR2 804 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SYNPOQ8N3V7 929 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 KIAA1958Q8N8K9 716 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 ARL14EPQ8N8R7 260 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PDZD8Q8NEN9 1154 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 OVCA2Q8WZ82 227 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 EXOC4Q96A65 974 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SMARCD1Q96GM5 515 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 FAXDC2Q96IV6 333 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SLITRK1Q96PX8 696 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 CYP2S1Q96SQ9 504 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 SDCBP2Q9H190 292 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 FAM124BQ9H5Z6 455 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-213ENST00000554508 PCDHA5Q9Y5H7 936 aa9.27□□□□□ -0.93
ACTN1-213ENST00000554508 ZNF840PA6NDX5 716 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 SLC16A3O15427 465 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 KINO60870 393 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TRIM49P0CI25 452 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TRIM49CP0CI26 452 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ASPAP45381 313 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 SOX9P48436 509 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 CCR3P51677 355 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 NDST1P52848 882 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 CACNA2D1P54289 1103 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 NRLP54845 237 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 LRRC63Q05C16 580 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TNK2Q07912 1038 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TAF10Q12962 218 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 USP4Q13107 963 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 MTAPQ13126 283 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 NR1H3Q13133 447 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 MTF1Q14872 753 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms