RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ARRDC4Q8NCT1 418 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 SPATA20Q8TB22 786 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 TRAPPC12Q8WVT3 735 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 KCNN1Q92952 543 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ZBTB10Q96DT7 871 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CEP170P1Q96L14 293 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 TRIM9Q9C026 710 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 NUP62CLQ9H1M0 184 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 BLZF1Q9H2G9 400 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 DHX33Q9H6R0 707 aaKnown RBP6.94□□□□□ -1.3
SCFD1-212ENST00000554486 POLD4Q9HCU8 107 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CRTAC1Q9NQ79 661 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 NRBP2Q9NSY0 501 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF215Q9UL58 517 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-212ENST00000554486 RSPH10B2B2RC85 870 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 USO1O60763 962 aaKnown RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 SGPL1O95470 568 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 TSPAN15O95858 294 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 RSPH10BP0C881 870 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 PNLIPP16233 465 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 HOXC8P31273 242 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 SARSP49591 514 aaKnown RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 GYS2P54840 703 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 SOX10P56693 466 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 IGBP1P78318 339 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 ADAM17P78536 824 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF200P98182 395 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 AMPD3Q01432 767 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 PPFIA1Q13136 1202 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 LSAMPQ13449 338 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 GIT2Q14161 759 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 MARCH8Q5T0T0 291 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 LINC01465Q8N7H1 131 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 PCSK9Q8NBP7 692 aaKnown RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 U2AF1L4Q8WU68 220 aaKnown RBP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 LMBR1Q8WVP7 490 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 TOX2Q96NM4 488 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 TNFRSF12AQ9NP84 129 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 XPNPEP1Q9NQW7 623 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 SETD4Q9NVD3 440 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCFD1-212ENST00000554486 MARCH2Q9P0N8 246 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 HDAC6Q9UBN7 1215 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 SFMBT1Q9UHJ3 866 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 TUBE1Q9UJT0 475 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 PCDHA5Q9Y5H7 936 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 X6R8D5 127 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 COL1A2P08123 1366 aa6.93□□□□□ -1.3
SCFD1-212ENST00000554486 IGKV6-21A0A0C4DH24 114 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 TCRBV16S1A1N1A0A5B0 115 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 FRMD3A2A2Y4 597 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 MBLAC1A4D2B0 266 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 RRN3P2A6NIE6 340 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 KBTBD13C9JR72 458 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 ARVCFO00192 962 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 DNM1LO00429 736 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 HIP1RO75146 1068 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 MAFO75444 373 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CABYRO75952 493 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 C22orf31O95567 290 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 TFRCP02786 760 aaKnown RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 FUCA1P04066 466 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 MYL1P05976 194 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 GLI4P10075 376 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 SDHBP21912 280 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 KLRC1P26715 233 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF131P52739 623 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 ASIC1P78348 528 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CYP4F8P98187 520 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 COASYQ13057 564 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 DRP2Q13474 957 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 EMC2Q15006 297 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 ABHD17CQ6PCB6 329 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 UNC13DQ70J99 1090 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CEP68Q76N32 757 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 MAEAQ7L5Y9 396 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 SESTD1Q86VW0 696 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 LZTR1Q8N653 840 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 PCDH19Q8TAB3 1148 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 NINJ1Q92982 152 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 SYAP1Q96A49 352 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 TMEM143Q96AN5 459 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CCDC34Q96HJ3 373 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CCDC43Q96MW1 224 aaKnown RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 CTAGE1Q96RT6 745 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 REEP2Q9BRK0 252 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 LRRC27Q9C0I9 530 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 HOOK1Q9UJC3 728 aaKnown RBP6.92□□□□□ -1.3
SCFD1-212ENST00000554486 MAN1B1Q9UKM7 699 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 NRCAMQ92823 1304 aa6.92□□□□□ -1.3
SCFD1-212ENST00000554486 PVALEFA0A1B0GWK0 134 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 C22orf46C9J442 243 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 AQP7O14520 342 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms