RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 FAM124BQ9H5Z6 455 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 KIF9Q9HAQ2 790 aa13.89□□□□□ -0.19
SHMT2-211ENST00000554310 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 METTL14Q9HCE5 456 aaKnown RBP13.89□□□□□ -0.19
SHMT2-211ENST00000554310 KANSL1LA0AUZ9 987 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 ARNTLO00327 626 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 BIN1O00499 593 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 CHADO15335 359 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 PDE6CP51160 858 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 NDST1P52848 882 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 NHLH1Q02575 133 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 TCF15Q12870 199 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 ZNF268Q14587 947 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-211ENST00000554310 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 TTI2Q6NXR4 508 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 CRYBG2Q8N1P7 616 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 TTC39CQ8N584 583 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 BPIFB1Q8TDL5 484 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 SLC35C1Q96A29 364 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 MSANTD3Q96H12 275 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 OSBPL6Q9BZF3 934 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-211ENST00000554310 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 HMGXB4Q9UGU5 601 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 CTNND2Q9UQB3 1225 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 SIT1Q9Y3P8 196 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 WDFY4Q6ZS81 3184 aa13.88□□□□□ -0.19
SHMT2-211ENST00000554310 MYH10P35580 1976 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 TRAV19A0A0A6YYK7 116 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 CLDN5O00501 218 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 MAN2B1O00754 1011 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 PI15O43692 258 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 CILPO75339 1184 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 GLULP15104 373 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 PFKLP17858 780 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 PPP3CCP48454 512 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 MLLT6P55198 1093 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 PAK1Q13153 545 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 C1orf228Q6PIY5 440 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 ZNF852Q6ZMS4 543 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 RBM43Q6ZSC3 357 aaKnown RBP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 FILIP1Q7Z7B0 1213 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 MAB21L3Q8N8X9 362 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 FOXQ1Q9C009 403 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 SMG9Q9H0W8 520 aaKnown RBP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 LTB4R2Q9NPC1 389 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 KRT82Q9NSB4 513 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 TDP1Q9NUW8 608 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 TMEM30AQ9NV96 361 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 THG1LQ9NWX6 298 aaKnown RBP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 RAB20Q9NX57 234 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 MRPS17Q9Y2R5 130 aaKnown RBP13.87□□□□□ -0.19
SHMT2-211ENST00000554310 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
SHMT2-211ENST00000554310 RTN3O95197 1032 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CKMP06732 381 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CCDC130P13994 396 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CD58P19256 250 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 MAGEA9P43362 315 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 USP46P62068 366 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 UBXN2BQ14CS0 331 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CCDC40Q4G0X9 1142 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CBWD3Q5JTY5 395 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CBWD5Q5RIA9 395 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 DTWD2Q8NBA8 298 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 SLC2A14Q8TDB8 520 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CSGALNACT1Q8TDX6 532 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 SEMA4DQ92854 862 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 USP13Q92995 863 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-211ENST00000554310 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 NELL2Q99435 816 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 DUSP9Q99956 384 aaKnown RBP13.86□□□□□ -0.19
SHMT2-211ENST00000554310 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 DLGAP2Q9P1A6 1054 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 PIAS3Q9Y6X2 628 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
SHMT2-211ENST00000554310 LRRN2O75325 713 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 AP1G2O75843 785 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 GNA14O95837 355 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 USP17L7P0C7H9 530 aa13.85□□□□□ -0.19
SHMT2-211ENST00000554310 USP4Q13107 963 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms